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SCNpilot_cont_1000_p_scaffold_6202_9

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

partial RP 35 / 55 MC: 1 BSCG 36 / 51 MC: 1 ASCG 8 / 38
Location: comp(6705..6986)

Top 3 Functional Annotations

Value Algorithm Source
lysA; diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 88.0
  • Bit_score: 124
  • Evalue 1.70e-26
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain Y25).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 88.0
  • Bit_score: 124
  • Evalue 7.70e-26
Diaminopimelate decarboxylase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTI6_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 92.0
  • Bit_score: 124
  • Evalue 5.50e-26

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Taxonomy

Ketogulonicigenium vulgare → Ketogulonicigenium → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
GCCCCCGGCGCACCGCATGAGGTTTATGACGTGGTCGGCCCGGTGTGCGAAACCGCGGACCGTTTCGCGGAAGCGCGCAGCCTGCCGCGCCTCAATTCCGGCGATCTTGTTGCTATCATGAGCGCGGGCGCCTATGGCGCGGTGATGGCTTCGGCCTACAATGCGCGGCCGCCCGCGCCGGAAGTGCTGGTCAAAGGCGACAGATTCAGCGTGGTGCGCCCCCGGATGAGCTATGAAGGGTTCCTTGAGCAAGACCGCGTCCCAGCCTGGCTTGAAGACTGA
PROTEIN sequence
Length: 94
APGAPHEVYDVVGPVCETADRFAEARSLPRLNSGDLVAIMSAGAYGAVMASAYNARPPAPEVLVKGDRFSVVRPRMSYEGFLEQDRVPAWLED*