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SCNpilot_cont_1000_bf_scaffold_467_4

Organism: SCNPILOT_CONT_1000_BF_Burkholderiales_64_18

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 1529..2149

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034BCB24 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 404
  • Evalue 7.90e-110
  • rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 206.0
  • Bit_score: 400
  • Evalue 1.20e-108
LSU ribosomal protein L1E (= L4P); K02926 large subunit ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 206.0
  • Bit_score: 371
  • Evalue 2.30e-100
  • rbh

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Taxonomy

Pandoraea sputorum → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGAACTGAAGCTCCTGAATGAGCAAGGTCAGGAAGGCGCAGCGGTCAACGCGTCGGACGTCGTGTTCGGCCGTGACTACAACGAAGCGCTGATCCATCAGGTTGTGGTGGCTTACCAAGCCAACGCCCGCAGCGGCAATCGTGCGCAGAAAGACCGTGAACAGGTCAAGCACACGACCAAGAAGCCGTGGCGTCAGAAGGGTACGGGTCGTGCTCGTGCCGGTATGTCGTCGAGCCCGTTGTGGCGCGGCGGTGGCCGTATCTTCCCGAATTCGCCGGAAGAGAACTTCACCCACAAGGTCAACAAGAAGATGTACCGCGCGGGTGTGTGCTCGATTCTGTCGCAGCTCGCCCGTGAAGGTCGTCTGTCGGTGGTCGAGGACATCAAGCTGGATGCGCCGAAGACCAAACTGCTCGCTGAAAAGATCAAGGCCATGGGTCTTGAGTCGGTGCTGCTGATCACGGATAGCGTGGACGAGAACCTGTTCCTGGCCTCGCGCAATCTGGCTCACGTTGCCGTCACCGAGCCGCGTTTCGCCGACCCGCTGTCGCTCATCTACTTCAAGACGGTGCTGGTGACGAAGGGCGCGATCGCCAAGATTGAGGAGATGCTGTCATGA
PROTEIN sequence
Length: 207
MELKLLNEQGQEGAAVNASDVVFGRDYNEALIHQVVVAYQANARSGNRAQKDREQVKHTTKKPWRQKGTGRARAGMSSSPLWRGGGRIFPNSPEENFTHKVNKKMYRAGVCSILSQLAREGRLSVVEDIKLDAPKTKLLAEKIKAMGLESVLLITDSVDENLFLASRNLAHVAVTEPRFADPLSLIYFKTVLVTKGAIAKIEEMLS*