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SCNpilot_cont_1000_bf_scaffold_467_15

Organism: SCNPILOT_CONT_1000_BF_Burkholderiales_64_18

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 6606..7145

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5 n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X7J8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 351
  • Evalue 4.00e-94
  • rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 351
  • Evalue 5.70e-94
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 178.0
  • Bit_score: 332
  • Evalue 6.10e-89
  • rbh

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGCCCGTTTGCAAGAATTCTATAAAGACAAGGTTGTCGCCGAGCTGACAAAGCAGTTCGGTTACAAGTCTGTCATGGAAGTGCCGCGCATCACCAAGATCACCCTGAACATGGGCCTTGGTCAAGCCGTTGCTGACAAGAAGATCATTGAGCACGCCGTTGGCGACCTGACGAAAATCGCCGGCCAAAAGCCGGTGGTGACGAAGGCTCGCAAGGCAATTGCCGGTTTCAAGATCCGCGAAGGTTACCCGATCGGTACGATGGTGACGCTGCGCGGCGAGCGTATGTTCGAATTCCTGGATCGTTTCATCACCGTGGCTCTGCCGCGCGTGCGTGACTTCCGTGGTATTTCGGGTCGTGCGTTCGATGGTCGTGGCAACTACAACATCGGTGTGAAGGAACAGATCATCTTCCCCGAAATCGAGTACGACAAAATCGACGCGCTGCGTGGTCTGAATATCAGCATCACCACGACCGCGAAGACTGACGAAGAAGCGAAGGCTCTTCTGTCGGCGTTCAAATTCCCGTTCCGTAACTGA
PROTEIN sequence
Length: 180
MARLQEFYKDKVVAELTKQFGYKSVMEVPRITKITLNMGLGQAVADKKIIEHAVGDLTKIAGQKPVVTKARKAIAGFKIREGYPIGTMVTLRGERMFEFLDRFITVALPRVRDFRGISGRAFDGRGNYNIGVKEQIIFPEIEYDKIDALRGLNISITTTAKTDEEAKALLSAFKFPFRN*