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SCNpilot_cont_1000_bf_scaffold_467_26

Organism: SCNPILOT_CONT_1000_BF_Burkholderiales_64_18

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 11726..12091

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034AF360 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 245
  • Evalue 3.60e-62
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315, ECO:0000313|EMBL:AJE98017.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 121.0
  • Bit_score: 243
  • Evalue 1.50e-61
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 121.0
  • Bit_score: 224
  • Evalue 1.60e-56

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Taxonomy

Pandoraea apista → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGGCTCGTATCGCAGGGGTTAACATCCCGAACCACCAGCACACCGCAATCGGCTTGACGGCCATTTACGGTGTCGGCCGCACGCGCGCTCGCCAGATTTGCGACGCCGCCGGTGTGCCGTTTTCGAAGAAGGTCAAAGACCTCGACGACGCTGATCTCGAAAAGCTGCGTGATCAAGTCGGTCAACTGACGGTCGAGGGCGACCTGCGCCGTGAAGTGACCATGAACATCAAGCGCCTGATGGACCTGGGCTGCTATCGTGGTATGCGTCACCGCAAGGGCTTGCCGCTTCGCGGTCAGCGCACCCGTACCAATGCGCGTACCCGCAAGGGCCCGCGTAAGGCCGGCGTCTCGCTGAAGAAGTAA
PROTEIN sequence
Length: 122
MARIAGVNIPNHQHTAIGLTAIYGVGRTRARQICDAAGVPFSKKVKDLDDADLEKLRDQVGQLTVEGDLRREVTMNIKRLMDLGCYRGMRHRKGLPLRGQRTRTNARTRKGPRKAGVSLKK*