ggKbase home page

AMDSBA1_1_29

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: 35207..35956

Top 3 Functional Annotations

Value Algorithm Source
pspA; phage shock protein A similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 242.0
  • Bit_score: 222
  • Evalue 1.90e-55
PspA/IM30 family protein n=1 Tax=Nitrosococcus halophilus Nc4 RepID=D5BUN1_NITHN (db=UNIREF evalue=3.5e-47 bit_score=194.1 identity=40.9 coverage=92.4) similarity UNIREF
DB: UNIREF
  • Identity: 40.9
  • Coverage: 92.4
  • Bit_score: 194
  • Evalue 3.50e-47
coiled-coil (db=Coil db_id=coil from=211 to=239 evalue=NA) iprscan interpro
DB: Coil
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 750
ATGGCAGGATTAATGGACCGCGTAAAGACTATTCTAGGTGCAAAGGCTAACCGCGCTTTAGACTCAGTGGAGGACCCTACCGAGACCGTTGAGTATTCGTACCAGAAGATGCAAGAGGCGCTACAAGAGACGAAGCGGCACATTTTAGAAGTAGTTACCGCAAAAAAGCAACTGGAAATGCAAGTAGCAACGTTGCAGCAAAAAGCCAATCAGTATTCTCTGGATGCGAAAGATGCCGTGAAGGCAGGGCGCGACGATCTCGCCACTCAGGCTCTATCGATGAAGGCGACCACCGAACAGCAAATTCAAGATATGCAAAAGCACGTCGAAGAAACGCAAGCCGAACAAGACAAACTGATGACGGCCCAGCAAAAACTTGAAGCACAAATCGAATCCTTCCGCACGCAGAAAGAAGTCATGAAAGCCCAATATTCCGCAGCAAAGGCCGAAGTTCAAGTGGGGGAAACAGTCCACGGAATTACCCAGCACGCCGAAGACGTGTCAGGAGCTTTACAAAGAGCTCAAGACAAAATCAGCCACATGCAGGCCAAAGCTTCGGCTTTGGACGAATTGGACACTTCTTCCGACATGAATGCCCTGCCACAATCAGATGGGGACACTATTCGTCAACAACTCAACGCGTCCAATCAGAATGCATCTGTCCAAGACGAACTGGCCAAATTGAAACAGGAGATGCAACAATCGGAAAAACCGTTGGATTCCTCGTCTGCGGACAAATCAACCGAATAA
PROTEIN sequence
Length: 250
MAGLMDRVKTILGAKANRALDSVEDPTETVEYSYQKMQEALQETKRHILEVVTAKKQLEMQVATLQQKANQYSLDAKDAVKAGRDDLATQALSMKATTEQQIQDMQKHVEETQAEQDKLMTAQQKLEAQIESFRTQKEVMKAQYSAAKAEVQVGETVHGITQHAEDVSGALQRAQDKISHMQAKASALDELDTSSDMNALPQSDGDTIRQQLNASNQNASVQDELAKLKQEMQQSEKPLDSSSADKSTE*