ggKbase home page

AMDSBA1_12_13
Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
TetR family transcriptional regulator similarity KEGG
DB: KEGG
38.6 176.0 127 4.90e-27 tmr:Tmar_1415
TetR-family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JNA4_RHOER (db=UNIREF evalue=1.2e-07 bit_score=62.4 identity=30.6 coverage=85.64102564102564) similarity UNIREF
DB: UNIREF
30.6 85.64 62 1.20e-07 tmr:Tmar_1415
Homeodomain-like (db=superfamily db_id=SSF46689 from=2 to=80 evalue=4.2e-17 interpro_id=IPR009057 interpro_description=Homeodomain-like GO=Molecular Function: protein binding (GO:0005515)) iprscan interpro
DB: superfamily
null
null
null
4.20e-17 tmr:Tmar_1415
(db=HMMPfam db_id=PF00440 from=10 to=56 evalue=4.4e-14 interpro_id=IPR001647 interpro_description=DNA-binding HTH domain, TetR-type GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: HMMPfam
null
null
null
4.40e-14 tmr:Tmar_1415
no description (db=Gene3D db_id=G3DSA:1.10.10.60 from=6 to=56 evalue=1.1e-10 interpro_id=IPR012287 interpro_description=Homeodomain-related GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: Gene3D
null
null
null
1.10e-10 tmr:Tmar_1415
Tetracyclin repressor-like, C-terminal domain (db=superfamily db_id=SSF48498 from=77 to=188 evalue=7.1e-08 interpro_id=IPR011075 interpro_description=Tetracycline transcriptional regulator, TetR-related, C-terminal) iprscan interpro
DB: superfamily
null
null
null
7.10e-08 tmr:Tmar_1415
HTHTETR (db=FPrintScan db_id=PR00455 from=10 to=23 evalue=3.6e-06 interpro_id=IPR023773 interpro_description=Transcription regulator HTH, TetR-type) iprscan interpro
DB: FPrintScan
null
null
null
3.60e-06 tmr:Tmar_1415
HTHTETR (db=FPrintScan db_id=PR00455 from=31 to=54 evalue=3.6e-06 interpro_id=IPR023773 interpro_description=Transcription regulator HTH, TetR-type) iprscan interpro
DB: FPrintScan
null
null
null
3.60e-06 tmr:Tmar_1415
HTH_TETR_2 (db=ProfileScan db_id=PS50977 from=4 to=64 evalue=18.871 interpro_id=IPR001647 interpro_description=DNA-binding HTH domain, TetR-type GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: ProfileScan
null
null
null
1.89e+01 tmr:Tmar_1415
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADU51528.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter. UNIPROT
DB: UniProtKB
38.6 176.0 127 2.50e-26 E6SMN6_THEM7
Transcriptional regulator, TetR family n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SMN6_THEM7 similarity UNIREF
DB: UNIREF90
38.6
null
126 7.20e-27 tmr:Tmar_1415