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AMDSBA1_16_30 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
bacterial regulatory helix-turn-helix, lysR family protein similarity KEGG
DB: KEGG
51.7 290.0 293 6.30e-77 bmeg:BG04_4143
Hypothetical transcriptional regulator, LysR family n=1 Tax=Moritella sp. PE36 RepID=A6FDH9_9GAMM (db=UNIREF evalue=5.3e-13 bit_score=80.9 identity=24.4 coverage=89.57654723127035) similarity UNIREF
DB: UNIREF
24.4 89.58 80 5.30e-13 bmeg:BG04_4143
seg (db=Seg db_id=seg from=229 to=242) iprscan interpro
DB: Seg
null null null null bmeg:BG04_4143
(db=HMMPfam db_id=PF03466 from=89 to=290 evalue=9.8e-43 interpro_id=IPR005119 interpro_description=LysR, substrate-binding) iprscan interpro
DB: HMMPfam
null null null 9.80e-43 bmeg:BG04_4143
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=91 to=294 evalue=1.8e-37) iprscan interpro
DB: superfamily
null null null 1.80e-37 bmeg:BG04_4143
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=89 evalue=7.8e-28) iprscan interpro
DB: superfamily
null null null 7.80e-28 bmeg:BG04_4143
no description (db=Gene3D db_id=G3DSA:3.40.190.10 from=88 to=188 evalue=2.6e-25) iprscan interpro
DB: Gene3D
null null null 2.60e-25 bmeg:BG04_4143
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=87 evalue=2.9e-25 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 2.90e-25 bmeg:BG04_4143
(db=HMMPfam db_id=PF00126 from=3 to=62 evalue=8.9e-25 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 8.90e-25 bmeg:BG04_4143
HTHLYSR (db=FPrintScan db_id=PR00039 from=39 to=50 evalue=5.9e-11 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 5.90e-11 bmeg:BG04_4143
HTHLYSR (db=FPrintScan db_id=PR00039 from=29 to=39 evalue=5.9e-11 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 5.90e-11 bmeg:BG04_4143
HTHLYSR (db=FPrintScan db_id=PR00039 from=18 to=29 evalue=5.9e-11 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 5.90e-11 bmeg:BG04_4143
HTH_LYSR (db=ProfileScan db_id=PS50931 from=1 to=58 evalue=36.405 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 3.64e+01 bmeg:BG04_4143
Als operon regulatory protein AlsR n=1 Tax=Sporosarcina newyorkensis 2681 RepID=F9DMY8_9BACL similarity UNIREF
DB: UNIREF90
50.8 null 293 7.00e-77 bmeg:BG04_4143
Bacterial regulatory helix-turn-helix, lysR family protein {ECO:0000313|EMBL:AJI20279.1}; TaxID=1348623 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus me UNIPROT
DB: UniProtKB
51.7 290.0 293 3.10e-76 A0A0B6AKE0_BACME