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AMDSBA1_20_24

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: 20600..21310

Top 3 Functional Annotations

Value Algorithm Source
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 233.0
  • Bit_score: 221
  • Evalue 2.30e-55
Peptidoglycan N-acetylglucosamine deacetylase A n=1 Tax=Brevibacterium mcbrellneri ATCC 49030 RepID=D4YJZ5_9MICO (db=UNIREF evalue=5.1e-24 bit_score=117.1 identity=32.3 coverage=78.05907172995781) similarity UNIREF
DB: UNIREF
  • Identity: 32.3
  • Coverage: 78.06
  • Bit_score: 117
  • Evalue 5.10e-24
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 711
GTGAATGACAGCTCAAGATGGCTTCTTCTCAGTCCCATGATCATCATAGCGCTAGCCTTTTGGTTAGTCAGCCAGCCTACAAGCGTTCAGGGGGCTTTAATCCATGTGGTCACCAACAAGAAAATCGCGGCCCTGACGTTCGACGACGGGCCTTCCCCCACATACACTCCTCTCATTCTCAGGACCTTGTCGCGGTACCATGCCCATGCCACCTTTTTCGTTGTTGGCCGTGAGGCTCAGCGTTTTCCTTACCTTGTCTTGGACATCGCCAAACAGGGATCGGTTGTGGCCAATCACGGGTGGAGCCATCTCAATTTACGCAATGAAGGAGCGACGGCCCTCTGGGCCGATGCCGACAAAACCGCCCAATACATCACATCGCTGGGTATATCCGTTGTCCCCTTTTACCGGCCTCCTTATGGTCTGGTATCTCATGATCTCCTGAAAACCTTTAGTGAACACGGTTATCGGGTCGTGTTATGGTCAATTGACACCAAGGACTGGACCCGTCCGGGAGTGACATCCATCATTCAACATGTAAGGGCACAAATTAAGCCCGGTGCCATTATTTTAATGCACGACGGCGGCGGCAACCGTTCCCAAACACTGGTAGCGTTAAATACGATTTTGGAACAGTTAACCCAAATGGGATACAAAATCGTGACCTTGCCAACTCTAGTCAAGGACAGCACCTCACCCCCCGCACTTTAG
PROTEIN sequence
Length: 237
VNDSSRWLLLSPMIIIALAFWLVSQPTSVQGALIHVVTNKKIAALTFDDGPSPTYTPLILRTLSRYHAHATFFVVGREAQRFPYLVLDIAKQGSVVANHGWSHLNLRNEGATALWADADKTAQYITSLGISVVPFYRPPYGLVSHDLLKTFSEHGYRVVLWSIDTKDWTRPGVTSIIQHVRAQIKPGAIILMHDGGGNRSQTLVALNTILEQLTQMGYKIVTLPTLVKDSTSPPAL*