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AMDSBA1_25_9

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(7460..7810)

Top 3 Functional Annotations

Value Algorithm Source
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=2 to=97 evalue=1.5e-17) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.50e-17
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=5 to=94 evalue=2.1e-13 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.10e-13
no description (db=HMMSmart db_id=SM00418 from=5 to=93 evalue=1.4e-08 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.40e-08

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Taxonomy

Oceanobacillus picturae → Oceanobacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 351
ATGAACCCTATCCAGATTTTTAAAGCGTTGGGCCAACCGCAGCGTTATGCGTTGTTTGAGGACTTGTTGCAAGTCCAGGGAGCCTCCTGTTGTGCCGATGTAATCCCCGAGGAGAGCGCTTGCTGCGTAGTGGATTTAACCCAGCGCCATCCCTTGGCCCAGTCCACTATTTCCCATCATTTGCAAGTTCTTATGGATGCGGGTCTGGTTACGGTGGAACGGCGGGGCACGTACCGCGTCTATCAGGTTAATCAAGAGACCTGGGAATCCTTTCAGCGCCATGTGGCGGATACCAAAGTCTGTGGTGCCATCCGTCGGCCTGTGGCTGTCGAGCCCGTTCTCGGGACGTAA
PROTEIN sequence
Length: 117
MNPIQIFKALGQPQRYALFEDLLQVQGASCCADVIPEESACCVVDLTQRHPLAQSTISHHLQVLMDAGLVTVERRGTYRVYQVNQETWESFQRHVADTKVCGAIRRPVAVEPVLGT*