ggKbase home page

AMDSBA1_55_10

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(10675..11157)

Top 3 Functional Annotations

Value Algorithm Source
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=141 evalue=3.2e-27) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.20e-27
no description (db=HMMSmart db_id=SM00347 from=28 to=128 evalue=4.8e-23 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.80e-23
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=35 to=108 evalue=8.7e-16 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.70e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicyclobacillus acidoterrestris → Alicyclobacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 483
GTGCATCAACAAGTTGATAGGTTAGCTGAACGATTTGATTCCGTGTTTATGATTCTGATGCAAAATCTGGGACCGCAGCTTATTAGCCGCGCTCAGCTGGAACTCACTCCAGGACAAGTCTTTATGCTGCATTTTATCCGTCAGAATCAGGAATTAAGTGTATCGGTCCTGGCTGAAAAGATGGAAGTCGCACCCAGTGCCATTACAGTAATGCTGGATCGTTTAGAAAGCCGGGCCTATGTCGGGCGCGTCCGTGACAAGAATGATCGCCGGGTGGTTCTGATTCACGTGACCGAAGAAGGCAATAAGGCTCTGGATCATGTGCTCGCAATTCGCCGACGGGCGCTACACTATTGTCTTGCGCAACTCCCAGCGGACCGTCTGGGCCCTTTCATGGAGAGTTTGGAGATGTTGGCCAATGCAGCTCAGAAGATGGACATCCATCACATTATCGGAGAATACGGCAGAGAGGAGCAAAACTAA
PROTEIN sequence
Length: 161
VHQQVDRLAERFDSVFMILMQNLGPQLISRAQLELTPGQVFMLHFIRQNQELSVSVLAEKMEVAPSAITVMLDRLESRAYVGRVRDKNDRRVVLIHVTEEGNKALDHVLAIRRRALHYCLAQLPADRLGPFMESLEMLANAAQKMDIHHIIGEYGREEQN*