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AMDSBA1_64_11

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: 11668..12057

Top 3 Functional Annotations

Value Algorithm Source
HTH_MARR_1 (db=PatternScan db_id=PS01117 from=54 to=88 evalue=0.0 interpro_id=IPR023187 interpro_description=Transcriptional regulator MarR-type, conserved site) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=5 to=128 evalue=1.1e-24) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.10e-24
no description (db=HMMSmart db_id=SM00347 from=15 to=115 evalue=2.0e-20 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.00e-20

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 390
ATGGAACAGGACTTGGCATTGCTTTTGATACGATTTCAAGATGCACTGGGCGGACAATACGGCCGGCTCTCGCGGCCCAAACTGCGATTAATGGTCAAACTAACGGAAGGTCCGGTGAGCGTGTCGGAATTGGCGGAACGCCTTCACATTTCTTCACCCGCAGTCAGTCAAATGATTGACAAACTGGTGGACGATGGTTTTGTGGTGCGTATGTCCCGGGAGCGCGATCAGCGCATGGTCAGCGTCATGATTACTCCCCCGGGAGAAGAAGCTCTGAAGGGAGCCCTGGCGGCCTTTCGCGACAGGGTGGAATCCTTGATGGCCGCATTGAGTCCCGAGGAACAGGCTGTGTTTACGGATTTGTTACGAACCATAGGGCAGGTGATTTGA
PROTEIN sequence
Length: 130
MEQDLALLLIRFQDALGGQYGRLSRPKLRLMVKLTEGPVSVSELAERLHISSPAVSQMIDKLVDDGFVVRMSRERDQRMVSVMITPPGEEALKGALAAFRDRVESLMAALSPEEQAVFTDLLRTIGQVI*