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SCNpilot_cont_1000_bf_scaffold_431_23

Organism: SCNPILOT_CONT_1000_BF_Mesorhizobium_partial_63_21

partial RP 26 / 55 MC: 1 BSCG 22 / 51 ASCG 9 / 38 MC: 1
Location: 20301..20792

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF8F1C related cluster n=1 Tax=unknown RepID=UPI0003CF8F1C similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 119.0
  • Bit_score: 186
  • Evalue 2.00e-44
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 119.0
  • Bit_score: 186
  • Evalue 2.90e-44
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 118.0
  • Bit_score: 179
  • Evalue 1.00e-42

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Taxonomy

Mesorhizobium sp. LSJC280B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGAGCCACGATACTTACGAGCTCAAGGCCGAAGCGCGCGAACGGGTCGGTAAGGGGTCCGCCCGTGAAGTTCGGCGCAACGGCAAGATACCCGCCGTCATCTACGGCGACAAGAAGCCTCCCCTGGCGATCGGCAAGGACACGATCGTGACCGTCTTCGTGCCCGTGCACTTCATCAACGAGGAAAAGTCGCCCGGCATCAAGCGCGGCGGCGTGCTCAACGTCGTGCGCCACGAAGTGGAGTTTCACTGCCCGGCGACCACGATCCCCGACTCCATCACGCTCGATCTCGACGGCACGGATATCGGCGACTCGCTCCACATCTCGGCCGTGAAGCTGCCGGAGGGCGTCACCCCGGTAATCTCCGACCGCGACTTCACCATCGCCACCATCGCCGGTTCCTCGGCTATGAAGCCGGAAGCCGCCGAGGAAGGCGCCGAAGCGGTGGAAGAAGAGGCCGGAGAGGAAGAAGAGAAGGGCGAGGAGGAATAA
PROTEIN sequence
Length: 164
MSHDTYELKAEARERVGKGSAREVRRNGKIPAVIYGDKKPPLAIGKDTIVTVFVPVHFINEEKSPGIKRGGVLNVVRHEVEFHCPATTIPDSITLDLDGTDIGDSLHISAVKLPEGVTPVISDRDFTIATIAGSSAMKPEAAEEGAEAVEEEAGEEEEKGEEE*