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SCNpilot_expt_500_bf_scaffold_2368_10

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(9559..10335)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK10_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 261.0
  • Bit_score: 309
  • Evalue 3.30e-81
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EHR70982.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 261.0
  • Bit_score: 309
  • Evalue 4.60e-81
membrane-fusion protein similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 258.0
  • Bit_score: 270
  • Evalue 4.10e-70

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Taxonomy

Burkholderiales bacterium JOSHI_001 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGGAAGCTGCTTCGCGCAACCGTCTAGCGCAAAGGAACTTGCAACGCGAGAAGCAGTTAGCCGCCGAAGGGATCGTGCCTGAGCGCAGAGCGCAAGACGCGGAGACTTTAGCAACGGAGGAGCGAGCCCGTCTGCGTCAAGCTGAAGCTGCCTTGAGACTGGCAGGCATGGATGCGGGCGCTATCAGTCGTGTCGCCGCAGGTGGCGCGATGCAGGACGCGCTAGTCATCCGAGCACGTGCGGGGGGCATCGTGACTGATCTTGGCGTCAAGCCGGGGCAACGAGTCCAACAATCTGATCCCCTTGCACGTGTCTCAGACACGCGCAAGCTATGGCTTGATATCCAATTGCCCGTAGAGCGCCAGTCGAGCGTGGCGGCGCGTGGCGGCCAAATCACCGTTGTTGGCAGGGATTCGGTTGCGGTCACCACCAGCCTGGGAACCACCGTCAGCGACAGCCAGACAATAGTGCTGCGCGCAGAGGTCACACGCGGGGCGGCGTCACTGCGGCCAGGCGAGTTCGTCCAGGCCCAAGTAGCCTTTGCCGTTGGCGGCGAAGGCTGGCCGGTGCCGGTCGCCGCCGTGGTGCGCCAGGGCGACAAGGCCTATGTTTTCGTGCGAACCGATAAGGGCTTCGTCGCCACGCCAGTGGATGTATTAGACAGCGCCGGCCAAGCGTTGCGGGTCAAGGGTGCGCTTCGCACTGGCCAGGAAATCGCCGTCACGTCCGTGATCGGGCTGAAGGCGGCATGGCTCGGCAAGGGCGGGGGCAATTGA
PROTEIN sequence
Length: 259
MEAASRNRLAQRNLQREKQLAAEGIVPERRAQDAETLATEERARLRQAEAALRLAGMDAGAISRVAAGGAMQDALVIRARAGGIVTDLGVKPGQRVQQSDPLARVSDTRKLWLDIQLPVERQSSVAARGGQITVVGRDSVAVTTSLGTTVSDSQTIVLRAEVTRGAASLRPGEFVQAQVAFAVGGEGWPVPVAAVVRQGDKAYVFVRTDKGFVATPVDVLDSAGQALRVKGALRTGQEIAVTSVIGLKAAWLGKGGGN*