ggKbase home page
Advanced Search
Search Help

AMDSBA3_5_5 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
uvrB; excinuclease ABC subunit B rbh KEGG
DB: KEGG 		80.9 666.0 1066 0.0 say:TPY_0846
uvrB; excinuclease ABC subunit B similarity KEGG
DB: KEGG 		80.9 666.0 1066 0.0 say:TPY_0846
UvrABC system protein B n=8 Tax=Caldicellulosiruptor RepID=UVRB_ANATD (db=UNIREF evalue=2.2e-245 bit_score=854.0 identity=63.8 coverage=97.46268656716418) similarity UNIREF
DB: UNIREF 		63.8 97.46 854 2.20e-245 say:TPY_0846
rbh rbh UNIREF
DB: UNIREF 		null null null null say:TPY_0846
seg (db=Seg db_id=seg from=263 to=273) iprscan interpro
DB: Seg 		null null null null say:TPY_0846
seg (db=Seg db_id=seg from=438 to=455) iprscan interpro
DB: Seg 		null null null null say:TPY_0846
coiled-coil (db=Coil db_id=coil from=259 to=284 evalue=NA) iprscan interpro
DB: Coil 		null null null null say:TPY_0846
uvrb: excinuclease ABC subunit B (db=HMMTigr db_id=TIGR00631 from=3 to=654 evalue=0.0 interpro_id=IPR004807 interpro_description=UvrABC system, B subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281), Biological Process: nucleotide-excision repair (GO:0006289), Molecular Function: excinuclease ABC activity (GO:0009381), Biological Process: SOS response (GO:0009432)) iprscan interpro
DB: HMMTigr 		null null null 0.0 say:TPY_0846
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=413 evalue=2.6e-140) iprscan interpro
DB: superfamily 		null null null 2.60e-140 say:TPY_0846
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=4 to=173 evalue=4.5e-72) iprscan interpro
DB: Gene3D 		null null null 4.50e-72 say:TPY_0846
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=410 to=577 evalue=2.9e-56) iprscan interpro
DB: Gene3D 		null null null 2.90e-56 say:TPY_0846
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=30 to=587 evalue=1.9e-38) iprscan interpro
DB: superfamily 		null null null 1.90e-38 say:TPY_0846
no description (db=HMMSmart db_id=SM00487 from=8 to=424 evalue=9.0e-25 interpro_id=IPR014001 interpro_description=DEAD-like helicase) iprscan interpro
DB: HMMSmart 		null null null 9.00e-25 say:TPY_0846
(db=HMMPfam db_id=PF12344 from=550 to=593 evalue=4.0e-20 interpro_id=IPR024759 interpro_description=UvrB, YAD/RRR-motif-containing domain) iprscan interpro
DB: HMMPfam 		null null null 4.00e-20 say:TPY_0846
no description (db=HMMSmart db_id=SM00490 from=458 to=544 evalue=6.9e-20 interpro_id=IPR001650 interpro_description=Helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: HMMSmart 		null null null 6.90e-20 say:TPY_0846
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=286 to=409 evalue=4.8e-16) iprscan interpro
DB: Gene3D 		null null null 4.80e-16 say:TPY_0846
(db=HMMPfam db_id=PF00271 from=463 to=542 evalue=7.7e-16 interpro_id=IPR001650 interpro_description=Helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: HMMPfam 		null null null 7.70e-16 say:TPY_0846
(db=HMMPfam db_id=PF04851 from=16 to=86 evalue=9.5e-10 interpro_id=IPR006935 interpro_description=Helicase/UvrB domain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP binding (GO:0005524), Molecular Function: hydrolase activity (GO:0016787)) iprscan interpro
DB: HMMPfam 		null null null 9.50e-10 say:TPY_0846
(db=HMMPfam db_id=PF02151 from=622 to=655 evalue=1.1e-07 interpro_id=IPR001943 interpro_description=UvrB/UvrC protein GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: HMMPfam 		null null null 1.10e-07 say:TPY_0846
C-terminal UvrC-binding domain of UvrB (db=superfamily db_id=SSF46600 from=606 to=655 evalue=2.1e-07 interpro_id=IPR009055 interpro_description=UvrB, C-terminal UvrC-binding GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: superfamily 		null null null 2.10e-07 say:TPY_0846
ATP-DEPENDENT RNA HELICASE (db=HMMPanther db_id=PTHR10967:SF51 from=432 to=499 evalue=1.8e-06) iprscan interpro
DB: HMMPanther 		null null null 1.80e-06 say:TPY_0846
DEAD BOX ATP-DEPENDENT RNA HELICASE (db=HMMPanther db_id=PTHR10967 from=432 to=499 evalue=1.8e-06) iprscan interpro
DB: HMMPanther 		null null null 1.80e-06 say:TPY_0846
no description (db=Gene3D db_id=G3DSA:4.10.860.10 from=599 to=661 evalue=1.7e-05) iprscan interpro
DB: Gene3D 		null null null 1.70e-05 say:TPY_0846
UVR (db=ProfileScan db_id=PS50151 from=621 to=656 evalue=11.093 interpro_id=IPR001943 interpro_description=UvrB/UvrC protein GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: ProfileScan 		null null null 1.11e+01 say:TPY_0846
HELICASE_ATP_BIND_1 (db=ProfileScan db_id=PS51192 from=25 to=159 evalue=15.992 interpro_id=IPR014001 interpro_description=DEAD-like helicase) iprscan interpro
DB: ProfileScan 		null null null 1.60e+01 say:TPY_0846
HELICASE_CTER (db=ProfileScan db_id=PS51194 from=429 to=591 evalue=21.08 interpro_id=IPR001650 interpro_description=Helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: ProfileScan 		null null null 2.11e+01 say:TPY_0846
UvrB (db=HAMAP db_id=MF_00204 from=2 to=656 evalue=43.072 interpro_id=IPR004807 interpro_description=UvrABC system, B subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281), Biological Process: nucleotide-excision repair (GO:0006289), Molecular Function: excinuclease ABC activity (GO:0009381), Biological Process: SOS response (GO:0009432)) iprscan interpro
DB: HAMAP 		null null null 4.31e+01 say:TPY_0846
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0 UNIPROT
DB: UniProtKB 		80.9 666.0 1066 0.0 F8I9W4_SULAT