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AMDSBA3_5_7 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
uvrC; excinuclease ABC subunit C rbh KEGG
DB: KEGG
68.2 616.0 852 9.30e-245 say:TPY_0848
uvrC; excinuclease ABC subunit C similarity KEGG
DB: KEGG
68.2 616.0 852 9.30e-245 say:TPY_0848
UvrABC system protein C n=1 Tax=Megasphaera micronuciformis F0359 RepID=E2Z9W6_9FIRM (db=UNIREF evalue=1.3e-132 bit_score=479.2 identity=41.5 coverage=95.03205128205127) similarity UNIREF
DB: UNIREF
41.5 95.03 479 1.30e-132 say:TPY_0848
seg (db=Seg db_id=seg from=383 to=395) iprscan interpro
DB: Seg
null null null null say:TPY_0848
coiled-coil (db=Coil db_id=coil from=210 to=235 evalue=NA) iprscan interpro
DB: Coil
null null null null say:TPY_0848
rbh rbh UNIREF
DB: UNIREF
null null null null say:TPY_0848
uvrC: excinuclease ABC subunit C (db=HMMTigr db_id=TIGR00194 from=9 to=594 evalue=3.8e-171 interpro_id=IPR004791 interpro_description=Excinuclease ABC, C subunit GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Cellular Component: excinuclease repair complex (GO:0009380), Molecular Function: excinuclease ABC activity (GO:0009381)) iprscan interpro
DB: HMMTigr
null null null 3.80e-171 say:TPY_0848
(db=HMMPfam db_id=PF08459 from=388 to=547 evalue=4.1e-54 interpro_id=IPR001162 interpro_description=Excinuclease ABC, C subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: HMMPfam
null null null 4.10e-54 say:TPY_0848
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=18 to=103 evalue=1.5e-22 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: superfamily
null null null 1.50e-22 say:TPY_0848
RuvA domain 2-like (db=superfamily db_id=SSF47781 from=479 to=614 evalue=2.4e-22 interpro_id=IPR010994 interpro_description=RuvA domain 2-like) iprscan interpro
DB: superfamily
null null null 2.40e-22 say:TPY_0848
no description (db=HMMSmart db_id=SM00465 from=19 to=101 evalue=1.8e-21 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMSmart
null null null 1.80e-21 say:TPY_0848
C-terminal UvrC-binding domain of UvrB (db=superfamily db_id=SSF46600 from=192 to=247 evalue=1.5e-12 interpro_id=IPR009055 interpro_description=UvrB, C-terminal UvrC-binding GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: superfamily
null null null 1.50e-12 say:TPY_0848
no description (db=Gene3D db_id=G3DSA:1.10.150.20 from=560 to=615 evalue=5.0e-12) iprscan interpro
DB: Gene3D
null null null 5.00e-12 say:TPY_0848
(db=HMMPfam db_id=PF02151 from=211 to=241 evalue=8.4e-08 interpro_id=IPR001943 interpro_description=UvrB/UvrC protein GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: HMMPfam
null null null 8.40e-08 say:TPY_0848
(db=HMMPfam db_id=PF01541 from=20 to=96 evalue=9.1e-08 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMPfam
null null null 9.10e-08 say:TPY_0848
no description (db=HMMSmart db_id=SM00278 from=561 to=580 evalue=10.0 interpro_id=IPR003583 interpro_description=Helix-hairpin-helix DNA-binding motif, class 1 GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMSmart
null null null 1.00e+01 say:TPY_0848
UVR (db=ProfileScan db_id=PS50151 from=207 to=242 evalue=11.419 interpro_id=IPR001943 interpro_description=UvrB/UvrC protein GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: ProfileScan
null null null 1.14e+01 say:TPY_0848
UVRC_1 (db=ProfileScan db_id=PS50164 from=20 to=97 evalue=24.335 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: ProfileScan
null null null 2.43e+01 say:TPY_0848
UvrC (db=HAMAP db_id=MF_00203 from=6 to=612 evalue=29.139 interpro_id=IPR004791 interpro_description=Excinuclease ABC, C subunit GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Cellular Component: excinuclease repair complex (GO:0009380), Molecular Function: excinuclease ABC activity (GO:0009381)) iprscan interpro
DB: HAMAP
null null null 2.91e+01 say:TPY_0848
UVRC_2 (db=ProfileScan db_id=PS50165 from=259 to=490 evalue=48.238 interpro_id=IPR001162 interpro_description=Excinuclease ABC, C subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: ProfileScan
null null null 4.82e+01 say:TPY_0848
no description (db=HMMSmart db_id=SM00278 from=593 to=612 evalue=95.0 interpro_id=IPR003583 interpro_description=Helix-hairpin-helix DNA-binding motif, class 1 GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMSmart
null null null 9.50e+01 say:TPY_0848
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0 UNIPROT
DB: UniProtKB
68.2 616.0 852 4.60e-244 G8TYJ5_SULAD