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AMDSBA3_8_4 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
transcriptional regulator similarity KEGG
DB: KEGG
54.8 290.0 302 1.30e-79 tco:Theco_0362
Transcriptional activator MetR n=11 Tax=Alteromonadales RepID=Q3IKK4_PSEHT (db=UNIREF evalue=3.8e-08 bit_score=64.7 identity=23.7 coverage=86.13861386138613) similarity UNIREF
DB: UNIREF
23.7 86.14 64 3.80e-08 tco:Theco_0362
seg (db=Seg db_id=seg from=282 to=293) iprscan interpro
DB: Seg
null null null null tco:Theco_0362
seg (db=Seg db_id=seg from=205 to=214) iprscan interpro
DB: Seg
null null null null tco:Theco_0362
(db=HMMPfam db_id=PF03466 from=94 to=295 evalue=5.9e-39 interpro_id=IPR005119 interpro_description=LysR, substrate-binding) iprscan interpro
DB: HMMPfam
null null null 5.90e-39 tco:Theco_0362
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=90 to=296 evalue=1.3e-38) iprscan interpro
DB: superfamily
null null null 1.30e-38 tco:Theco_0362
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=4 to=115 evalue=4.5e-28) iprscan interpro
DB: superfamily
null null null 4.50e-28 tco:Theco_0362
(db=HMMPfam db_id=PF00126 from=7 to=65 evalue=6.7e-23 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 6.70e-23 tco:Theco_0362
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=4 to=90 evalue=2.3e-19 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 2.30e-19 tco:Theco_0362
no description (db=Gene3D db_id=G3DSA:3.40.190.10 from=93 to=154 evalue=7.4e-10) iprscan interpro
DB: Gene3D
null null null 7.40e-10 tco:Theco_0362
HTHLYSR (db=FPrintScan db_id=PR00039 from=42 to=53 evalue=1.2e-08 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.20e-08 tco:Theco_0362
HTHLYSR (db=FPrintScan db_id=PR00039 from=32 to=42 evalue=1.2e-08 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.20e-08 tco:Theco_0362
HTHLYSR (db=FPrintScan db_id=PR00039 from=21 to=32 evalue=1.2e-08 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.20e-08 tco:Theco_0362
no description (db=Gene3D db_id=G3DSA:3.40.190.10 from=171 to=271 evalue=1.8e-08) iprscan interpro
DB: Gene3D
null null null 1.80e-08 tco:Theco_0362
HTH_LYSR (db=ProfileScan db_id=PS50931 from=1 to=61 evalue=26.989 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 2.70e+01 tco:Theco_0362
Transcriptional regulator n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0E9X3_THECK similarity UNIREF
DB: UNIREF90
54.8 null 302 1.90e-79 tco:Theco_0362
Transcriptional regulator {ECO:0000313|EMBL:AGA56587.1}; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DS UNIPROT
DB: UniProtKB
54.8 290.0 302 6.60e-79 L0E9X3_THECK