ggKbase home page

AMDSBA3_16_13

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 16167..16709

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, PadR-like family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVJ5_9CHLR (db=UNIREF evalue=1.1e-31 bit_score=142.1 identity=40.3 coverage=96.13259668508287) similarity UNIREF
DB: UNIREF
  • Identity: 40.3
  • Coverage: 96.13
  • Bit_score: 142
  • Evalue 1.10e-31
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=2 to=180 evalue=6.7e-25) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 6.70e-25
(db=HMMPfam db_id=PF03551 from=2 to=77 evalue=3.5e-13 interpro_id=IPR005149 interpro_description=Transcription regulator PadR N-terminal) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.50e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicyclobacillus acidoterrestris → Alicyclobacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 543
GTGTACGAACTGTTTGTGCTGGGGGAGCTCTCGGACGGCCCCATGCATGGCTATCTACTGCATGAAGTTCTCGTCAAAGTGCTGGGGCCCACGCGTGGGGTGAGTTGGGGCACACTATATCCGGTGCTTAAGCATCTGGACGAGCAATCTTACATCCATCAAGTCGATGGCGGCTCGCTTTATCATGGACGCGCGAGAAAAGTCTACGAAATCACCGCTATAGGACGAGGCCACTTTTTTGAACTGATGGCGAAGCCCTTGGCGCATAATGCCGATGCGGACGACATATTCCGCATTAAGTTGTCGAAGTTCCATTTGATCGATGTCTCTTTAAGACGCGAGATTTTGCATCAATACAAGATGTTTCTGGACTTTGTCTTAAACGGCCTCGTCCTAAATCAAGAACGGGTCACGCGGGAGTCCGCCATTAGCGAGGCAGAACGTCCTGACATTGTGCAGGCGATCGACTATCAGATACATAGCTATACCGCACGGCTGGTCTGGGTCACGCAAAAACTGGAGTGCTTAGGGGGAACCGAATGA
PROTEIN sequence
Length: 181
VYELFVLGELSDGPMHGYLLHEVLVKVLGPTRGVSWGTLYPVLKHLDEQSYIHQVDGGSLYHGRARKVYEITAIGRGHFFELMAKPLAHNADADDIFRIKLSKFHLIDVSLRREILHQYKMFLDFVLNGLVLNQERVTRESAISEAERPDIVQAIDYQIHSYTARLVWVTQKLECLGGTE*