ggKbase home page

AMDSBA3_29_11
Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
53.5 226.0 249 7.70e-64 pmq:PM3016_1499
Putative two-component system regulator n=2 Tax=Streptomyces ambofaciens RepID=Q0JWC2_STRAM (db=UNIREF evalue=2.8e-27 bit_score=127.9 identity=36.2 coverage=93.85964912280701) similarity UNIREF
DB: UNIREF
36.2 93.86 127 2.80e-27 pmq:PM3016_1499
seg (db=Seg db_id=seg from=169 to=180) iprscan interpro
DB: Seg
null
null
null
null
pmq:PM3016_1499
seg (db=Seg db_id=seg from=47 to=60) iprscan interpro
DB: Seg
null
null
null
null
pmq:PM3016_1499
TWO-COMPONENT SYSTEM SENSOR HISTIDINE KINASE/RESPONSE REGULATOR (INTESTINAL BACTERIA - BACTEROIDES THETAIOTAOMICRON) (db=HMMPanther db_id=PTHR23283:SF21 from=4 to=119 evalue=2.2e-24) iprscan interpro
null
null
null
null
pmq:PM3016_1499
CheY-like (db=superfamily db_id=SSF52172 from=2 to=189 evalue=4.7e-40 interpro_id=IPR011006 interpro_description=CheY-like superfamily) iprscan interpro
DB: superfamily
null
null
null
4.70e-40 pmq:PM3016_1499
no description (db=HMMSmart db_id=SM00448 from=3 to=113 evalue=5.6e-37 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null
null
null
5.60e-37 pmq:PM3016_1499
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=4 to=119 evalue=3.6e-33) iprscan interpro
DB: Gene3D
null
null
null
3.60e-33 pmq:PM3016_1499
(db=HMMPfam db_id=PF00072 from=5 to=113 evalue=2.1e-26 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null
null
null
2.10e-26 pmq:PM3016_1499
SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=4 to=119 evalue=2.2e-24) iprscan interpro
DB: HMMPanther
null
null
null
2.20e-24 pmq:PM3016_1499
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=121 to=224 evalue=2.6e-24 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null
null
null
2.60e-24 pmq:PM3016_1499
no description (db=HMMSmart db_id=SM00862 from=147 to=224 evalue=2.7e-24 interpro_id=IPR001867 interpro_description=Signal transduction response regulator, C-terminal GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null
null
null
2.70e-24 pmq:PM3016_1499
(db=HMMPfam db_id=PF00486 from=150 to=224 evalue=7.0e-24 interpro_id=IPR001867 interpro_description=Signal transduction response regulator, C-terminal GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null
null
null
7.00e-24 pmq:PM3016_1499
RESPONSE_REGULATORY (db=ProfileScan db_id=PS50110 from=4 to=117 evalue=37.916 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null
null
null
3.79e+01 pmq:PM3016_1499
KDP operon transcriptional regulatory protein kdpE {ECO:0000313|EMBL:KFN10345.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacill UNIPROT
DB: UniProtKB
59.8 224.0 274 1.90e-70 A0A090ZJA4_PAEMA
Winged helix family two component transcriptional regulator n=1 Tax=Paenibacillus mucilaginosus 3016 RepID=H6NGY2_9BACL similarity UNIREF
DB: UNIREF90
53.5
null
249 1.10e-63 pmq:PM3016_1499