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AMDSBA3_35_9

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(7595..8446)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 252.0
  • Bit_score: 279
  • Evalue 8.70e-73
tRNA pseudouridine synthase A n=1 Tax=Bacillus clausii KSM-K16 RepID=TRUA_BACSK (db=UNIREF evalue=1.8e-23 bit_score=115.5 identity=34.5 coverage=86.97183098591549) similarity UNIREF
DB: UNIREF
  • Identity: 34.5
  • Coverage: 86.97
  • Bit_score: 115
  • Evalue 1.80e-23
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=19 to=267 evalue=3.1e-57 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.10e-57

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 852
ATGGTTGATGAGTACACGGCACCCTGGATTGCTCGGGGTGCCGTGCTTTCATGGGATGACCGACCAGACTTGTGTTTAGTTGTGCGTTACGATGGGACGGACTATCATGGATTTCAGAAGCAGGCAGCCGGCGCGACCATTCAGGGGGAGCTTGAGCGCGTATTGACGGCTCTGCTCGGTGCGGGTGAGATTGTGGGGGCCAGCCGTACGGATGCGGGCGTACATGCCTGCGGACAAGTGGTGGTGTGGCGCGGACCGGTTCAAGTGCCCATCGAGCGAATTGCGATGGTGGCCAACCGCAAGCTTCCGCGGGCCATCCAAATCGTCCAGGCGTGGTGGGTGCCCAGTGGTTGGGATCCGCGTAGGGCGGCGCGGGCTAAGCAGTACAGCTATCGGCTCTGGCGTGCGCCAGGTCCGCCTGACCTTCACTGGCATCGGTTTGTCCAGCCAAGCGGCGCCGCCCTCTCGTGGCAACGCTTACAGCGGGCGGCTGCGCTCTTTGAGGGAACCCACGATTTTTGGGCGTTTCGGACGGAGGGGGCAGGGGTGCAGTCCACGATTCGCACAATTTTCGCGAGCCGTTGGATAATTGAAGAGAAGGGCAATATTTGGCGGTACCAAGTTGTCGGCAACGGCTTCTTGTACCGTATGGTTCGACACATGGTGGGAAGTATGATTTGCGCGGCTGAGCCGCAGGGCTCCCTTAAGGAGATCGAATCGAGTCTTGGCCGCGGGACGCATAAAGTGGCGCCGTTGGCACCGGCCCGCGGGTTAATGTTGGACTGGATTGATTTCGGGAATGAGGAGGGATTCGGACATGTTTCGGGAAGTCGTGTTGGGACTCGGGGATAA
PROTEIN sequence
Length: 284
MVDEYTAPWIARGAVLSWDDRPDLCLVVRYDGTDYHGFQKQAAGATIQGELERVLTALLGAGEIVGASRTDAGVHACGQVVVWRGPVQVPIERIAMVANRKLPRAIQIVQAWWVPSGWDPRRAARAKQYSYRLWRAPGPPDLHWHRFVQPSGAALSWQRLQRAAALFEGTHDFWAFRTEGAGVQSTIRTIFASRWIIEEKGNIWRYQVVGNGFLYRMVRHMVGSMICAAEPQGSLKEIESSLGRGTHKVAPLAPARGLMLDWIDFGNEEGFGHVSGSRVGTRG*