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AMDSBA3_35_11 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) rbh similarity KEGG
DB: KEGG 		88.4 320.0 570 3.60e-160 sap:Sulac_0315
DNA-directed RNA polymerase subunit alpha n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=RPOA_ALKMQ (db=UNIREF evalue=1.2e-111 bit_score=408.7 identity=63.8 coverage=97.81931464174455) similarity UNIREF
DB: UNIREF 		63.8 97.82 408 1.20e-111 sap:Sulac_0315
rbh rbh UNIREF
DB: UNIREF 		null null null null sap:Sulac_0315
seg (db=Seg db_id=seg from=244 to=255) iprscan interpro
DB: Seg 		null null null null sap:Sulac_0315
seg (db=Seg db_id=seg from=114 to=125) iprscan interpro
DB: Seg 		null null null null sap:Sulac_0315
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=25 to=318 evalue=8.1e-172 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr 		null null null 8.10e-172 sap:Sulac_0315
no description (db=HMMSmart db_id=SM00662 from=25 to=232 evalue=1.3e-92 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMSmart 		null null null 1.30e-92 sap:Sulac_0315
Insert subdomain of RNA polymerase alpha subunit (db=superfamily db_id=SSF56553 from=55 to=176 evalue=2.1e-47 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: superfamily 		null null null 2.10e-47 sap:Sulac_0315
no description (db=Gene3D db_id=G3DSA:2.170.120.12 from=55 to=175 evalue=5.2e-43 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: Gene3D 		null null null 5.20e-43 sap:Sulac_0315
RBP11-like subunits of RNA polymerase (db=superfamily db_id=SSF55257 from=6 to=233 evalue=6.6e-32 interpro_id=IPR009025 interpro_description=DNA-directed RNA polymerase, RBP11-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: superfamily 		null null null 6.60e-32 sap:Sulac_0315
(db=HMMPfam db_id=PF03118 from=245 to=309 evalue=4.2e-30 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam 		null null null 4.20e-30 sap:Sulac_0315
C-terminal domain of RNA polymerase alpha subunit (db=superfamily db_id=SSF47789 from=250 to=316 evalue=1.7e-24 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: superfamily 		null null null 1.70e-24 sap:Sulac_0315
(db=HMMPfam db_id=PF01193 from=31 to=230 evalue=1.3e-23 interpro_id=IPR011261 interpro_description=DNA-directed RNA polymerase, dimerisation GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 1.30e-23 sap:Sulac_0315
no description (db=Gene3D db_id=G3DSA:1.10.150.20 from=247 to=315 evalue=2.2e-23) iprscan interpro
DB: Gene3D 		null null null 2.20e-23 sap:Sulac_0315
(db=HMMPfam db_id=PF01000 from=64 to=157 evalue=1.7e-22 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 1.70e-22 sap:Sulac_0315
RPOA_THETN_Q8R7Y2; (db=BlastProDom db_id=PD001179 from=258 to=316 evalue=1.0e-21 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: BlastProDom 		null null null 1.00e-21 sap:Sulac_0315
no description (db=Gene3D db_id=G3DSA:3.30.1360.10 from=2 to=55 evalue=0.0001) iprscan interpro
DB: Gene3D 		null null null 1.00e-04 sap:Sulac_0315
RNApol_bact_RpoA (db=HAMAP db_id=MF_00059 from=6 to=318 evalue=37.538 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HAMAP 		null null null 3.75e+01 sap:Sulac_0315
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase UNIPROT
DB: UniProtKB 		88.4 320.0 570 1.80e-159 G8TXI5_SULAD