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AMDSBA3_35_14
Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
rpsM; 30S ribosomal protein S13 similarity KEGG
DB: KEGG
88.6 123.0 227 1.70e-57 say:TPY_0347
30S ribosomal protein S13, chloroplastic n=1 Tax=Cyanidioschyzon merolae RepID=RR13_CYAME (db=UNIREF evalue=1.1e-30 bit_score=138.3 identity=53.8 coverage=95.16129032258065) similarity UNIREF
DB: UNIREF
53.8 95.16 138 1.10e-30 say:TPY_0347
RIBOSOMAL_S13_1 (db=PatternScan db_id=PS00646 from=88 to=101 evalue=0.0 interpro_id=IPR018269 interpro_description=Ribosomal protein S13, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
null
null
null
0.0 say:TPY_0347
bact_S13: 30S ribosomal protein S13 (db=HMMTigr db_id=TIGR03631 from=3 to=115 evalue=1.5e-78 interpro_id=IPR019980 interpro_description=Ribosomal protein S13, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMTigr
null
null
null
1.50e-78 say:TPY_0347
30S RIBOSOMAL PROTEIN S13 (db=HMMPanther db_id=PTHR10871:SF1 from=1 to=122 evalue=8.7e-59) iprscan interpro
DB: HMMPanther
null
null
null
8.70e-59 say:TPY_0347
30S/40S RIBOSOMAL PROTEIN (db=HMMPanther db_id=PTHR10871 from=1 to=122 evalue=8.7e-59 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPanther
null
null
null
8.70e-59 say:TPY_0347
Ribosomal protein, S13p/S13a/S18e/organellar S13 types (db=HMMPIR db_id=PIRSF002134 from=1 to=122 evalue=8.7e-56 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPIR
null
null
null
8.70e-56 say:TPY_0347
S13-like H2TH domain (db=superfamily db_id=SSF46946 from=2 to=121 evalue=1.8e-44 interpro_id=IPR010979 interpro_description=Ribosomal protein S13-like, H2TH GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: superfamily
null
null
null
1.82e-44 say:TPY_0347
(db=HMMPfam db_id=PF00416 from=3 to=109 evalue=8.2e-38 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPfam
null
null
null
8.20e-38 say:TPY_0347
no description (db=Gene3D db_id=G3DSA:1.10.8.50 from=1 to=72 evalue=4.2e-22) iprscan interpro
DB: Gene3D
null
null
null
4.20e-22 say:TPY_0347
no description (db=Gene3D db_id=G3DSA:4.10.910.10 from=73 to=122 evalue=1.4e-18) iprscan interpro
DB: Gene3D
null
null
null
1.40e-18 say:TPY_0347
RIBOSOMAL_S13_2 (db=ProfileScan db_id=PS50159 from=4 to=112 evalue=40.412 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: ProfileScan
null
null
null
4.04e+01 say:TPY_0347
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source= UNIPROT
DB: UniProtKB
88.6 123.0 227 8.50e-57 F8I5Q8_SULAT
  • SCG Annotations
  • BSCG ribosomal protein S13