ggKbase home page

AMDSBA3_35_24
Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
50S ribosomal protein L6 rbh similarity KEGG
DB: KEGG
78.8 179.0 300 2.30e-79 sap:Sulac_0302
50S ribosomal protein L6 n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=RL6_LAWIP (db=UNIREF evalue=1.1e-37 bit_score=162.2 identity=47.5 coverage=98.33333333333333) similarity UNIREF
DB: UNIREF
47.5 98.33 162 1.10e-37 sap:Sulac_0302
RIBOSOMAL_L6_1 (db=PatternScan db_id=PS00525 from=154 to=162 evalue=0.0 interpro_id=IPR002358 interpro_description=Ribosomal protein L6, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
null
null
null
0.0 sap:Sulac_0302
L6_bact: ribosomal protein L6 (db=HMMTigr db_id=TIGR03654 from=2 to=176 evalue=6.0e-107 interpro_id=IPR019906 interpro_description=Ribosomal protein L6, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMTigr
null
null
null
6.00e-107 sap:Sulac_0302
60S/50S RIBOSOMAL PROTEIN L6/L9 (db=HMMPanther db_id=PTHR11655 from=2 to=179 evalue=3.8e-76 interpro_id=IPR000702 interpro_description=Ribosomal protein L6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMPanther
null
null
null
3.80e-76 sap:Sulac_0302
50S RIBOSOMAL PROTEIN L6 (db=HMMPanther db_id=PTHR11655:SF6 from=2 to=179 evalue=3.8e-76 interpro_id=IPR019906 interpro_description=Ribosomal protein L6, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMPanther
null
null
null
3.80e-76 sap:Sulac_0302
Ribosomal protein, L6p/L6a/L9e/organellar L9 types (db=HMMPIR db_id=PIRSF002162 from=1 to=177 evalue=3.9e-43 interpro_id=IPR000702 interpro_description=Ribosomal protein L6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMPIR
null
null
null
3.90e-43 sap:Sulac_0302
no description (db=Gene3D db_id=G3DSA:3.90.930.12 from=83 to=178 evalue=5.6e-34 interpro_id=IPR020040 interpro_description=Ribosomal protein L6, alpha-beta domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: Gene3D
null
null
null
5.60e-34 sap:Sulac_0302
RIBOSOMALL6 (db=FPrintScan db_id=PR00059 from=99 to=115 evalue=1.8e-33 interpro_id=IPR019906 interpro_description=Ribosomal protein L6, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: FPrintScan
null
null
null
1.80e-33 sap:Sulac_0302
RIBOSOMALL6 (db=FPrintScan db_id=PR00059 from=141 to=162 evalue=1.8e-33 interpro_id=IPR019906 interpro_description=Ribosomal protein L6, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: FPrintScan
null
null
null
1.80e-33 sap:Sulac_0302
RIBOSOMALL6 (db=FPrintScan db_id=PR00059 from=71 to=96 evalue=1.8e-33 interpro_id=IPR019906 interpro_description=Ribosomal protein L6, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: FPrintScan
null
null
null
1.80e-33 sap:Sulac_0302
Ribosomal protein L6 (db=superfamily db_id=SSF56053 from=83 to=171 evalue=5.5e-30 interpro_id=IPR020040 interpro_description=Ribosomal protein L6, alpha-beta domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: superfamily
null
null
null
5.50e-30 sap:Sulac_0302
no description (db=Gene3D db_id=G3DSA:3.90.930.12 from=2 to=82 evalue=1.8e-24 interpro_id=IPR020040 interpro_description=Ribosomal protein L6, alpha-beta domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: Gene3D
null
null
null
1.80e-24 sap:Sulac_0302
Ribosomal protein L6 (db=superfamily db_id=SSF56053 from=5 to=82 evalue=2.4e-21 interpro_id=IPR020040 interpro_description=Ribosomal protein L6, alpha-beta domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: superfamily
null
null
null
2.40e-21 sap:Sulac_0302
(db=HMMPfam db_id=PF00347 from=11 to=82 evalue=8.2e-19 interpro_id=IPR020040 interpro_description=Ribosomal protein L6, alpha-beta domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMPfam
null
null
null
8.20e-19 sap:Sulac_0302
(db=HMMPfam db_id=PF00347 from=91 to=164 evalue=3.8e-18 interpro_id=IPR020040 interpro_description=Ribosomal protein L6, alpha-beta domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMPfam
null
null
null
3.80e-18 sap:Sulac_0302
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Se UNIPROT
DB: UniProtKB
78.8 179.0 300 1.10e-78 G8TXH2_SULAD
  • SCG Annotations
  • BSCG ribosomal protein L6P L9E