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AMDSBA3_122_1

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 2..238

Top 3 Functional Annotations

Value Algorithm Source
Putative type II secretion system protein n=2 Tax=Sulfobacillus thermotolerans RepID=G5CIZ5_9FIRM (db=UNIREF evalue=2.1e-27 bit_score=126.7 identity=82.1 coverage=97.46835443037975) similarity UNIREF
DB: UNIREF
  • Identity: 82.1
  • Coverage: 97.47
  • Bit_score: 126
  • Evalue 2.10e-27
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=67) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Sulfobacillus thermotolerans → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 237
CAACGCATTCAAGCGGACGCTGTGCGGCGCGGAACCTTGGCCGGCAGCACGATGTTGGGCTATGGCGTGGTGTTGCTCGGGATTGTGGCATTTTGGGCGTCGGTAGCGCTGAGCCCCGCCGTGCGTCACGGCCTGGACCATGGGCTGGGGTTGGTGACCACGGGGCTCGGGGCTTGGCTGATTGCTTTAGCCGGATACATTCAAAATCGGGTGAGCCGTCAGGCGGAGGCGGTCTAA
PROTEIN sequence
Length: 79
QRIQADAVRRGTLAGSTMLGYGVVLLGIVAFWASVALSPAVRHGLDHGLGLVTTGLGAWLIALAGYIQNRVSRQAEAV*