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SCNpilot_cont_1000_p_scaffold_348

Search features with annotation key words

Displaying items 31-60 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_348_31
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34705..35763)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J2J7_CYCMS
Uncharacterized protein {ECO:0000313|EMBL:KEO75374.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_348_32
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35818..37614)
DNA (1797bp) protein (599aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Elongation factor 4 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDZ4_CHIPD rbh
GTP-binding protein LepA; K03596 GTP-binding protein LepA rbh
SCNpilot_cont_1000_p_scaffold_348_33
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37728..38297)
DNA (570bp) protein (190aa)
Contig181, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74499.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
pentapeptide repeat-containing protein id=2157705 bin=GWB2_Bacteroidetes_32_14 species=Pedobacter agri genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
hypothetical protein
SCNpilot_cont_1000_p_scaffold_348_34
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

38354..40780
DNA (2427bp) protein (809aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036EEF37 rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH55069.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_348_35
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(40816..42225)
DNA (1410bp) protein (470aa)
Uncharacterized protein id=4161675 bin=GWF2_Bacteroidetes_41_31 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
phospholipase D/Transphosphatidylase
Tax=BJP_IG2103_Bacteroidetes_37_22
SCNpilot_cont_1000_p_scaffold_348_36
unknown

Not on your lists

42364..42717
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_348_37
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42776..44182)
DNA (1407bp) protein (469aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] rbh
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Dihydrolipoyl dehydrogenase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIA7_CHIPD rbh
SCNpilot_cont_1000_p_scaffold_348_38
unknown

Not on your lists

comp(44373..44576)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_348_39
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44628..45017)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KP93_SOLCM
Glyoxalase {ECO:0000313|EMBL:KIA94476.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_348_40
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

45302..47101
DNA (1800bp) protein (600aa)
Glutamate synthase [NADPH] small chain {ECO:0000313|EMBL:EMR03139.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EMR03139.1};; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
glutamate synthase n=1 Tax=Flexithrix dorotheae RepID=UPI00036202CC rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
SCNpilot_cont_1000_p_scaffold_348_41
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

47077..48909
DNA (1833bp) protein (611aa)
2-oxoglutarate oxidoreductase, alpha subunit {ECO:0000313|EMBL:EON76961.1}; EC=1.2.7.3 {ECO:0000313|EMBL:EON76961.1};; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
2-oxoacid:acceptor oxidoreductase subunit alpha; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] rbh
2-oxoglutarate oxidoreductase, alpha subunit n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZS41_9BACT rbh
SCNpilot_cont_1000_p_scaffold_348_42
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

48906..49958
DNA (1053bp) protein (351aa)
thiamine pyrophosphate TPP-binding domain-containing protein; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] rbh
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=Cecembia lonarensis LW9 RepID=K1LJ35_9BACT rbh
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:EKB50278.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
SCNpilot_cont_1000_p_scaffold_348_43
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

49977..50504
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI000364DB3D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK23633.1}; TaxID=860228 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus (strain 5).;"
SCNpilot_cont_1000_p_scaffold_348_44
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

50591..51709
DNA (1119bp) protein (373aa)
Cytochrome c peroxidase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YVJ0_AEQSU
cytochrome c peroxidase
Tax=BJP_IG2102_Flavobacteriales_34_12
SCNpilot_cont_1000_p_scaffold_348_45
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(51706..52380)
DNA (675bp) protein (225aa)
Putative uncharacterized protein id=2201164 bin=GWB2_Bacteroidetes_32_14 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
hypothetical protein
Tax=GWD2_Bacteroidetes_33_33_curated
SCNpilot_cont_1000_p_scaffold_348_46
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52737..53513
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z0E8_FLABF
Flp pilus assembly protein TadD {ECO:0000313|EMBL:GAF06007.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_348_47
unknown

Not on your lists

comp(53519..53854)
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_348_48
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(53930..55735)
DNA (1806bp) protein (602aa)
Uncharacterized protein {ECO:0000313|EMBL:KIF31681.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
SCNpilot_cont_1000_p_scaffold_348_49
unknown

Not on your lists

55813..56514
DNA (702bp) protein (234aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_348_50
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(56584..57954)
DNA (1371bp) protein (457aa)
Peptidase M20 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XT91_PEDHD
Contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIO79047.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
peptidase M20
SCNpilot_cont_1000_p_scaffold_348_51
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(58042..58758)
DNA (717bp) protein (239aa)
Putative uncharacterized protein id=4667147 bin=GWF2_Melioribacter_38_21 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
SCNpilot_cont_1000_p_scaffold_348_52
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

59015..60841
DNA (1827bp) protein (609aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B38EA2
cell surface receptor IPT/TIG domain-containing protein
Tax=CG_Bacteroid_01
SCNpilot_cont_1000_p_scaffold_348_53
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

60992..62041
DNA (1050bp) protein (350aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] rbh
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSY7_CHIPD rbh
SCNpilot_cont_1000_p_scaffold_348_54
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

62140..62712
DNA (573bp) protein (191aa)
phosphoheptose isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Phosphoheptose isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPQ5_NIAKG
SCNpilot_cont_1000_p_scaffold_348_55
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

62735..63316
DNA (582bp) protein (194aa)
histidinol-phosphate phosphatase family protein; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPQ7_NIAKG
SCNpilot_cont_1000_p_scaffold_348_56
Croceibacter atlanticus, Croceibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

63751..63867
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=4 Tax=Flavobacteriaceae RepID=A3U7N8_CROAH
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=216432 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Croceibacter.;" source="Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090).;"
SCNpilot_cont_1000_p_scaffold_348_57
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


63908..64288
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU95_CHIPD
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_348_58
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


64394..64795
DNA (402bp) protein (134aa)
30S ribosomal protein S11 n=1 Tax=Segetibacter koreensis RepID=UPI00035EBBAF
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
SCNpilot_cont_1000_p_scaffold_348_59
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


64913..65518
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI99_NIAKG
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
SCNpilot_cont_1000_p_scaffold_348_60
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

65617..66612
DNA (996bp) protein (332aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2
DNA-directed RNA polymerase subunit alpha n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU98_CHIPD
Displaying items 31-60 of 70 in total

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