ggKbase home page

SCNpilot_cont_1000_p_scaffold_157_23

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(20525..21733)

Top 3 Functional Annotations

Value Algorithm Source
lytic transglycosylase; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 402.0
  • Bit_score: 218
  • Evalue 2.90e-54
Lytic transglycosylase catalytic n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQE3_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 34.8
  • Coverage: 402.0
  • Bit_score: 218
  • Evalue 9.10e-54
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ACU58832.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.8
  • Coverage: 402.0
  • Bit_score: 218
  • Evalue 1.30e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1209
ATGCAATATAAAGTCATTCTCATAGCTTCGGCCTTACTCTTGTCGTTTGGCGCCATACAGGCCCAGCCCGACCCGGGTAATATCGAAGACTCTGTCACTACACTCCCTAAAGGCGTCAGGTCTATAAGCGCCCCCCTTGCTTCCAATACACTTACGGGGAATAAGGAAGAACTCACCGCACTTAGCGAACGTGAGATGGAAGATCAGGACCTGCTCGTACACGGCACTTTTGCTAAAAAATACAAGCCTGTTCCACTTGCAGGTCAGAAAGCCTATTTCGGCGATATGAACGATTATATGATGGACTTTGTGCGCAAATATTTCGAAGCGCATAATCAAAGCCTCAGCATTATGCAGGCCCGGGCCATCGTACAGTTCCCGCTTATCGATAATATTCTTAAAAAGAACCACATCCCAAAAGAGTTAAAATACCTTGCAGTAATTGAATCAGCCCTGAACAATAATGCTGTCTCTCCAGTAGGAGCAGTTGGGCCATGGCAGTTTATGCGGGGCACGGCACGCAATATGGGCATTAACCCTTCGGGCCGTGACGACAGGCGCGACTGGTATAAAAGCACCACTGCTGCAGCCAAATACATCAGCCTGCTCTATGGCAAGTTCAATGACTGGCTTTTGGTAGTAGCGGCATACAACTGTGGTCCTGTGCCAGTGCAACGCGCTATAGAGCGTACCGGAAGCAATAATTTCTGGGCTATAAAATCGCACCTGCCTCTTGAAACACAGGGTCATGTGCTGAAATTCATTGCCACAGCTACCATTTTTGAGCAGTTGGACCGTTTCATTGGCCTTGGTACACTCCCTTCGGATTTCAAATTCGGTGAAGATACCGGGCCGGCTGCTCAAATAGCTGCAGCTAAGGCAAAAACAGCAGCTGCCAACAAGAAAGCTGCCCTTGCCGGTGTTGCCCCCATTAAGAATGTGCCCAACTATACACATGATGAACTGATGAACATGACCATAGTGCGGATCACGGATCCCCTGAGCATGGACATTGTTGCCCAGGAGCTTTCTATCGACAAAAGCCTGCTGGCCAGGTGGAATTCAGACTACGACCTCTTCCTGATGAAGGCTTATCCTACAGAATATTACAAACTCAGGATACCCAAGGATAAGCTGGACCAGTTCGTGGAAAAGAAAGAAAGGCTTACCAAGCGCTCAGCGCAGATGTTCAGCGACCTGATCATGTAA
PROTEIN sequence
Length: 403
MQYKVILIASALLLSFGAIQAQPDPGNIEDSVTTLPKGVRSISAPLASNTLTGNKEELTALSEREMEDQDLLVHGTFAKKYKPVPLAGQKAYFGDMNDYMMDFVRKYFEAHNQSLSIMQARAIVQFPLIDNILKKNHIPKELKYLAVIESALNNNAVSPVGAVGPWQFMRGTARNMGINPSGRDDRRDWYKSTTAAAKYISLLYGKFNDWLLVVAAYNCGPVPVQRAIERTGSNNFWAIKSHLPLETQGHVLKFIATATIFEQLDRFIGLGTLPSDFKFGEDTGPAAQIAAAKAKTAAANKKAALAGVAPIKNVPNYTHDELMNMTIVRITDPLSMDIVAQELSIDKSLLARWNSDYDLFLMKAYPTEYYKLRIPKDKLDQFVEKKERLTKRSAQMFSDLIM*