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SCNpilot_cont_1000_p_scaffold_348_60

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 65617..66612

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 331.0
  • Bit_score: 522
  • Evalue 1.00e-145
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2 similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 331.0
  • Bit_score: 522
  • Evalue 4.50e-145
DNA-directed RNA polymerase subunit alpha n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU98_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 331.0
  • Bit_score: 522
  • Evalue 3.20e-145

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 996
ATGGCCATATTGAATTTCCAAAAACCGGATAAAATTGTTCTTCAGAAAGCAACTGATTTTGAAGCTCAGTTCGAATTCCGCCCGCTGGAACCCGGTTACGGCGTTACCATTGGTAACGCACTGCGCCGTGTTCTGCTTTCATCACTTGAAGGCTACGCCATCACTGCTATCAAAATAGCCGGTGCCGACCACGAATTTGCTACCATCAAAGGCGTGCTCGAAGACGTAACCGAAATAATCCTGAACCTGAAACAGGTACGCCTGAAAAAATCTGTCGAAGGCGACCCTGCCTCCGATAGGGTTGAACTTAATATAAAAGGTAAAGAGACCTTTACTGCCGGTATGATAGGCGAAGCATTACCCAGCTTTGAAGTAATGAACCCCGAACTGGTTATCTGCAGCATGGAGCCTGGTACTACCTTCCAGATCGAACTGCACATAGGCAAAGGCCGTGGTTATGTTCCTGCCGAAGAGAACCGCCCCAAAGACGGCACTACAGGCATGATAGCCATCGACTCTATCTACACGCCCATCAAAAACGTAAAATACAGCATTGAAAATACCCGCGTTGAGCAGCGCACCGACTTCGAAAAGCTCATCATGGAAGTAGCTACCGATGGTACCATACATCCTGAAGAAGCTGTAAAAGAAGCATCACGCATACTCATCCAGCACCTGATGATCATCACCGATGAGAATATCTCCCTGGATACAAAACGCGAAGAAAAAGAAGCAGTAGTGGACGAAGAAACACTGCAACTGCGCAAAGTATTGAATACCCCGCTCGAAGACCTGGAACTTTCTGTACGTGCATTCAATTGCCTGAAAGCTGCCAAGATCAATTCACTGAGCGAACTGGTACAATATACACAGGAAGAACTGATGAAATTCCGCAATTTCGGCCAGAAATCACTCTCTGAGATCGAGCAGGTACTTGGCGAACGCGGCCTGCACTTCGGTATGGACATCAGCAAATACCACAGGAGCGAAGATTAA
PROTEIN sequence
Length: 332
MAILNFQKPDKIVLQKATDFEAQFEFRPLEPGYGVTIGNALRRVLLSSLEGYAITAIKIAGADHEFATIKGVLEDVTEIILNLKQVRLKKSVEGDPASDRVELNIKGKETFTAGMIGEALPSFEVMNPELVICSMEPGTTFQIELHIGKGRGYVPAEENRPKDGTTGMIAIDSIYTPIKNVKYSIENTRVEQRTDFEKLIMEVATDGTIHPEEAVKEASRILIQHLMIITDENISLDTKREEKEAVVDEETLQLRKVLNTPLEDLELSVRAFNCLKAAKINSLSELVQYTQEELMKFRNFGQKSLSEIEQVLGERGLHFGMDISKYHRSED*