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SCNpilot_cont_1000_p_scaffold_676_55

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(56235..57356)

Top 3 Functional Annotations

Value Algorithm Source
mechanosensitive ion channel protein MscS n=1 Tax=Pedobacter agri RepID=UPI00029A16EA similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 364.0
  • Bit_score: 240
  • Evalue 3.60e-60
mechanosensitive ion channel MscS; K16052 MscS family membrane protein YnaI similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 358.0
  • Bit_score: 236
  • Evalue 1.60e-59
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ACU02268.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.6
  • Coverage: 358.0
  • Bit_score: 236
  • Evalue 7.20e-59

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1122
ATGACCTTATTGCTTGACATAGACAACCGTTTTTTCAATCAGCCTTTCTGGGGCGAAACTGTTGGTGACTACTGCTGGTTCGTGGGTATCATATTGGGCACCCTGCTGCTCAAAAAGCCCATAGCGCTGGCCTTGTCCAACATAGGGCACAACATTGCCAGCCGCATCAGCAAAGAGCAGCATGTGGCTGTATTTCGCGAACTGTTGCGCAAACCTATTGAATGGCTGGCCGTGCTCATCCTTTTCTATATTGCCATTACCCGCCTGTCTGATGTGCTCGACAATGTCATCATCATGCACCGTAATAAAGGCCTGGGCAATATACTGGATATAAGGCTGGGCGATGTGACAGACCATATATTCCTGCTGTTCATCATCATTGCCGCCACACTGGTATTATCGCGCACTGTCGATTTCGTTTACTTCGTGCAAAATGAGCGGGCCAGGCAGAACGACAACCAAAGCAGGCAGCAGTTATTGCCGCTGGTGAAAGAGATGATAAAACTGCTCGTATGGGCCATCAGCTTTTTCTGGATGCTCGGTTCTGTTTTTCATGTCAATATACCTGCGCTGATAACGGGCCTGGGTATCGGTGGTATAGCCATAGCACTGGCCGCCAAAGAAAGCGTGGAGAATTTCTTTGCAGCCTTCACCCTGCTTTCCGACAGGCCTTTCCAGGTGGGCGATACAATACGCATAGGCAATTTCCAGGGCGCGGTAGAACGCATAGGCTTCCGCAGCAGCCGCCTGCGCAGTGCCGACGGTTCGGCCTTCATCATCCCCAATCAAAAGCTCGTGAGTGAGAACCTGGAAAATCTTACTGACCGCATGACAAGCGGTGTGCATATGGTCATCAATATTAAATACGGACTGCCTTATGACCAGTTGCAGCAAATGGTTGCGGCCCTGAAAGAAATGATCACTGCTACTACACATGTACAGGACCCCATAAATGTATCGCTCGACGGTTTTTTAGAAAATGTGTTCCAGCTAAATATCCTCTACCACCTGCCTTACCCAATAGGCGATGCAACCACAAGACAAGTAAAACAGGATATAAACATGAAAGCCTACGATATTGTATCCCGATATACGGGCGATAAAACGGCAACAGTGTCTTAA
PROTEIN sequence
Length: 374
MTLLLDIDNRFFNQPFWGETVGDYCWFVGIILGTLLLKKPIALALSNIGHNIASRISKEQHVAVFRELLRKPIEWLAVLILFYIAITRLSDVLDNVIIMHRNKGLGNILDIRLGDVTDHIFLLFIIIAATLVLSRTVDFVYFVQNERARQNDNQSRQQLLPLVKEMIKLLVWAISFFWMLGSVFHVNIPALITGLGIGGIAIALAAKESVENFFAAFTLLSDRPFQVGDTIRIGNFQGAVERIGFRSSRLRSADGSAFIIPNQKLVSENLENLTDRMTSGVHMVINIKYGLPYDQLQQMVAALKEMITATTHVQDPINVSLDGFLENVFQLNILYHLPYPIGDATTRQVKQDINMKAYDIVSRYTGDKTATVS*