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SCNpilot_cont_1000_p_scaffold_1313_6

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(3461..3790)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2CWK5_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 94.0
  • Bit_score: 78
  • Evalue 4.00e-12
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI88940.1}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes F0041.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 94.0
  • Bit_score: 78
  • Evalue 5.70e-12
HTH_3 family transcriptional regulator protein similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 92.0
  • Bit_score: 70
  • Evalue 4.50e-10

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Taxonomy

Bacteroides pyogenes → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 330
ATGGATATAGGAACTGCTATAAAAACCGTAAGGACCCTTCGGGGGCTAAAGCAAACTGACCTGAGCATACTGATCGGCATATCTCAGACCTCCATCTCCCAGATCGAGAATGGTTATAAGAAACCAAAGAGCTCGACAATCAGGAAGATATGCACTGCACTCGAAGTGCCGGAGGTTGTGATCTATGTTCTGGGGATGCAGGGAGAGGACGTACCAGAAAGCAAAAAGGCCATTTTTGAACTCTTATGGCCGGCAATGCAGGAACTCATATTGCAACTAATACCTGCAATTCACAACATCCGCTATCTGGATGAGACCCTGACCTTATAA
PROTEIN sequence
Length: 110
MDIGTAIKTVRTLRGLKQTDLSILIGISQTSISQIENGYKKPKSSTIRKICTALEVPEVVIYVLGMQGEDVPESKKAIFELLWPAMQELILQLIPAIHNIRYLDETLTL*