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SCNpilot_cont_1000_p_scaffold_733_29

Organism: SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 5 ASCG 14 / 38
Location: comp(37096..37998)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix, AraC type n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPV4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 29.0
  • Coverage: 297.0
  • Bit_score: 130
  • Evalue 3.20e-27
Helix-turn-helix, AraC type {ECO:0000313|EMBL:EDM26399.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.0
  • Coverage: 297.0
  • Bit_score: 130
  • Evalue 4.50e-27
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 26.8
  • Coverage: 284.0
  • Bit_score: 78
  • Evalue 4.50e-12

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Taxonomy

Lentisphaera araneosa → Lentisphaera → Lentisphaerales → Lentisphaeria → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 903
GTGGCGCGTATCTCCCCGGCTTCCCCTCCTGGTCCGACGGCCGCCTTGCTTCCCGAAGTCTGGCGAAACCTCCAGGTCTCCCTGATCTGGGCCTATCGCGGCCGCGTGGCGGAGAAGTTTCTCGATTTTTCCTCGGAGAGGGGCAACGTCACCGCCCGGCTGCTTTTTTCCGGGCGAATGACCGTGCGGCGCGGCGAAGCCGTGAGCGTGGCTGTACCCGGGCAGTGGGTGGTCATGGGCAACGGGCCGAGTCATCTGAACTTTGAGCGCGGCTCGGAGATTCTTTCCATCCATCTCGATGCGCACTGGCACACCGGGCAGCAGGTGATCCCGGAGGGTGCGGTGGTCGTGGTCGACAGCCGTACGGAGGAGGAACTCACCCGCCTCGGGCGGGCTCTGGAGAAGTTCGTCCGTCATCGCCTCCATGATCCGCAGTTCAGCTTGTGGAGCCAGCCGCTGGAGTTGACCGACTATCTCGACAGCCAGGCCGTTTTTCTTCCCTGGCTGAGTGTTTTGTTTCGCGTCCTACAACAGGCGGGGACATCGCTTTTTGTCCCGGCCGCCCAGGATGACCGGATCACGCGGGTGCTGCACCTGCTGGGCGCGACGCCGCTGGATCAGCCTTTTGACGAGGCGCGGCTGATGGCCGCGGCCGGGATGAGCCGCAGCCACCTCAATCGCCTTTTCATTAGGCACACCGGGCTGACACCGCGAGGATTCGCCGAGAGGCGGCGGCAGGATTATGCCGGACGCCGTCTGCGCGAGCCGGATGTCAGCGTGAAGGTGGTTGCGCTTGAGCTGGGATTCCGGCAGCTCTCGCACTTCTCGCGCTGGTTCAAGGCCGCATCGGGTCTCACTCCGCGTGACTATCAGGCGCAAAGCCCGCTCAGGTTGCTGACGTAG
PROTEIN sequence
Length: 301
VARISPASPPGPTAALLPEVWRNLQVSLIWAYRGRVAEKFLDFSSERGNVTARLLFSGRMTVRRGEAVSVAVPGQWVVMGNGPSHLNFERGSEILSIHLDAHWHTGQQVIPEGAVVVVDSRTEEELTRLGRALEKFVRHRLHDPQFSLWSQPLELTDYLDSQAVFLPWLSVLFRVLQQAGTSLFVPAAQDDRITRVLHLLGATPLDQPFDEARLMAAAGMSRSHLNRLFIRHTGLTPRGFAERRRQDYAGRRLREPDVSVKVVALELGFRQLSHFSRWFKAASGLTPRDYQAQSPLRLLT*