ggKbase home page

SCNpilot_cont_1000_p_scaffold_1017_16

Organism: SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 5 ASCG 14 / 38
Location: 19303..20166

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:KKB11314.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.6
  • Coverage: 274.0
  • Bit_score: 139
  • Evalue 9.20e-30
AraC-type DNA-binding domain-containing protein-like protein id=4476231 bin=GWF2_Lentisphaerae_49_21 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good + similarity UNIREF
DB: UNIREF100
  • Identity: 28.6
  • Coverage: 273.0
  • Bit_score: 109
  • Evalue 5.60e-21
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 29.2
  • Coverage: 253.0
  • Bit_score: 100
  • Evalue 8.20e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia geojensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGGAGCGGGAGACATGGGAACACGACACCCGCCTGCTCAGAGAACTGTCCATCTTTGGCTGGCTGAGATTTCACAAAACCCTGCTCGGCGCCCTCCAGCCCGACCGTCACCTCGGTGAGTATGAGATCCACTATCTCAAACGGGGTCGGCTAAACTGGTGGGTGGAGACCACCGCGCATGAGTTTCGTCCGGGATCGGTCTTCATCATTCGTCCGGGGGAACTGCACGGCGGCGACGAGGAATCGCTTCAGCCCTGCGAACACCTCTGGTTCCGGATCAGACTCGGCCCCAAGTCTCTTCCCGGCTTGAGCGCCGATGAGTCCTCCGACCTCTGCAAGGGTTTCGAAGAAATCAGCCACACGACGTTTCCCGTCTCGACCGCGATAGGAGACTACCTCGACAAGATCCTGGTGGAACACCGCATGAAAGAGCCTCACGGCGGCATCATTGCCAGAGGACTCCTCCACGCCTGCCTCGCGACCATCATCAGGGACTACGCGACTTTTGCCAGTCAGACCAGGAATACCCCGCTCGTCACATGGCGCATCCGCCGCGCCCTGGAGATGCTCGATGAAGTTGCCGATCTCCAAAACCTGAAGATCGCCGACCTCGCGGAGAAAGTCGGTCTGAGCGAATCCGGATTCCGCGAGCGCTTCAAAGCCGAGATGGGATTTTCACCTCACGAGTACATCCTCGACCGCCGCATCACGGAAGCCCGGCAACGGCTTTCCGAGACGGACCTCGACGTCACCCGGATCGCCCTCGACCTCGGCTTTTCGAGCAGTCAATACTTTGCCACCGTGTTTCGTCGGCGCGTCGGCATGTCGCCCAGTGATTATCGCAAGCGCCACGACGAGGCGTAA
PROTEIN sequence
Length: 288
MERETWEHDTRLLRELSIFGWLRFHKTLLGALQPDRHLGEYEIHYLKRGRLNWWVETTAHEFRPGSVFIIRPGELHGGDEESLQPCEHLWFRIRLGPKSLPGLSADESSDLCKGFEEISHTTFPVSTAIGDYLDKILVEHRMKEPHGGIIARGLLHACLATIIRDYATFASQTRNTPLVTWRIRRALEMLDEVADLQNLKIADLAEKVGLSESGFRERFKAEMGFSPHEYILDRRITEARQRLSETDLDVTRIALDLGFSSSQYFATVFRRRVGMSPSDYRKRHDEA*