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SCNpilot_cont_1000_p_scaffold_1167_3

Organism: SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 5 ASCG 14 / 38
Location: 1297..2649

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XSJ2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 452.0
  • Bit_score: 358
  • Evalue 1.40e-95
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EHO42540.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 452.0
  • Bit_score: 358
  • Evalue 2.00e-95
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 449.0
  • Bit_score: 349
  • Evalue 2.10e-93

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Taxonomy

Caldithrix abyssi → Caldithrix → Bacteria

Sequences

DNA sequence
Length: 1353
ATGGGTGCCGGGAAGAGCCGTCCGCAATCGAATGTCCTCATCGTCGACGATGTGCCTGATTTTCTCAAAGAGACGTCGGCCGTGTTGCGGCCGCACTTCGGCGTGACCGTGTGCTCGAGTCCGCTGCGCGGGTTGCGCCTGATCAAGCAGGGCGGCATCGACCTGCTCATCACCACGCTGGTGATGCGCGAACTCGACGGGCTGGAGGTGATCCGGCGGGTGCGAGGCAGCGGCAGTGCGCTTCCTATTATTATGGTGACCGGATTCGGCAACGAAAACACGGCCATCGAGGCGACCCGCGTGGGCGCGACGGATTATCTCACCAAGCCGGTCGAGCCGGAGGAGCTCATCGCCCGCGTGCGTCGCGCGCTCACCTACGCGGACGTGCAGGAGGAGGTCGACGAACCCCTCGTGCTGAGCCAGGATAAGACCATGCTGGAGGTCATCGAGGTCTGCCGCCGGGTCGCCCGCTCGCCCAGCCGGGTGCTGATCCTCGGGGAAACCGGGACGGGCAAGGAGCTGTTTGCGCGCATGTTGCATGCGCGGAGCCAGCGCGTACGAGAGCCTTTTGTCGATGTGAACTGCGCTGCCATCCCGCCCAATCTCCTGGAGAGCGAGTTGTTTGGCCACGAGCGCGGAGCCTTTACCGGAGCCACCGAGCGGCGCGTCGGCCGGTTTGAGGAGGCCGGGGAGGGGACGCTCTTCCTCGATGAAATCGGCGAGCTCGGCATCGCGATGCAATCGAAGCTCCTGCGCGTGCTCCAGACCGGCGATTTCTCCCGGGTGGGCGGCTCGCGCAACCTGCGCTCCCAGGCCCGCGTCATCGCGGCGACGAACCGCGATCTGAGCCAGGAGGTGCAGGCCGGGCGCTTCCGCGCGGATCTTTACTATCGCCTGAATGTCGTGACTCTCGAAGTGCCGCCATTGCGCCAGCGCTTTGGCGACATTCCGATCCTGGTCCGCCATTTCAGCCGCAAATTTGTCCAGCCTGGCCATGAGCCAATCGGGTTTTCCCATGAAGCGATGCAACGATTGTGCGCCTACGGATGGCCGGGCAATGTGCGGGAGCTCGAGCATCTGATCGAACGCCTTTCCGTGCTGGTCACGAGGGGTGAGGTGCGGCTCTCGGATCTGCCAGCGCATTTCCAGGGGATCACCGAGGCGGCGCCTGTGGCTCCCGCCTCGACGAATCGCCCGTATCATGAGGCGTTGCAGGAATTTCAGCGTGTGTATTTCCAGAATCTCATCGCCGCCGCGCACGGCAATCTCGCCGCCGCGGCCCGGCAGGCCGGCATGGACCGGTCGCAGTTTTTCCGGAAGGTCCGGAGCCTGCGCCTTATTACTAACGGCTAG
PROTEIN sequence
Length: 451
MGAGKSRPQSNVLIVDDVPDFLKETSAVLRPHFGVTVCSSPLRGLRLIKQGGIDLLITTLVMRELDGLEVIRRVRGSGSALPIIMVTGFGNENTAIEATRVGATDYLTKPVEPEELIARVRRALTYADVQEEVDEPLVLSQDKTMLEVIEVCRRVARSPSRVLILGETGTGKELFARMLHARSQRVREPFVDVNCAAIPPNLLESELFGHERGAFTGATERRVGRFEEAGEGTLFLDEIGELGIAMQSKLLRVLQTGDFSRVGGSRNLRSQARVIAATNRDLSQEVQAGRFRADLYYRLNVVTLEVPPLRQRFGDIPILVRHFSRKFVQPGHEPIGFSHEAMQRLCAYGWPGNVRELEHLIERLSVLVTRGEVRLSDLPAHFQGITEAAPVAPASTNRPYHEALQEFQRVYFQNLIAAAHGNLAAAARQAGMDRSQFFRKVRSLRLITNG*