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SCNpilot_cont_1000_p_scaffold_1135_25

Organism: SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 5 ASCG 14 / 38
Location: comp(24016..25056)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional Regulator, AraC family n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0C3V1_ACAM1 similarity UNIREF
DB: UNIREF100
  • Identity: 26.8
  • Coverage: 254.0
  • Bit_score: 81
  • Evalue 1.50e-12
AraC family transcriptional regulator {ECO:0000313|EMBL:ETR78178.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.1
  • Coverage: 196.0
  • Bit_score: 84
  • Evalue 4.20e-13
AraC family transcriptional regulator; K07506 AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 26.8
  • Coverage: 254.0
  • Bit_score: 81
  • Evalue 4.70e-13

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
ATGCAGGACTGGGTAAAAATTCTTCGTGTTCGAAAGAACGCGATCAGGCTGAATGCGAATCTAGCAAGTTCAATCGCCCATTGCGCGCCCCTTGATGCTGTCGGATGGAATTTTCGGTGCGTGCAATGCCATGTCGCCACGGGCACCTATCCCTCCGGATTCGGTTACGGATGGCATTCACACGACGAATATCAACTCGAAATCGCGGTTGCCGGAGCCTTCGAGTTCATTACGGCGAAATCGGAACGGATCGTCGTCCGGCCCGGACGCGCACTCGTCATCCCTTGGAAAATGGCCCATCGCTGGAAGTGCATCAAACCGGGTGTGATGGTGGGTATTTCTCTGGAACTACTTCCCACTCCCGAGTCCATTCATCGCGATGGCTGGCTGATTGAAGACATCCGACAGGTGGCCAGCACCTCGATCAAGCTCAAGGTGGATGATCTGATCAAAGCGGGATTGGATATCAGGCATCCATCGTTTCACTCGAAGATCGTTGCCTGCCGGTTGTTTCTCTTGTTGGTGGAAATTTTGGAGGCGCTTCTTCCCGCGAAACGGACCGGAATGGACATGACGACGAAGATCGCCGCAACGGTGCGAGGCAGAGAAGTGGCGGGATGGGTTGTCCGCCATATCGATGAACATTTGGGAGCTGACATCAGCCTCATCCAAATAGCGCGAGAAGTGGGAATGAGTACCCGGCATCTGCATCGACTCTTCCTCAAGCACGTCGGCAAAAGCCTGCACGATTACTTGCTGGATCGCCGACTGGAGCACTCCCGCAAACTACTCACTGAAAATGGCGGCAAAATGCAGATAAAAGAGATCGCCTTCACCTGCGGGTTCAATTCTCTCGCCTATTTCAGCAATTCCTTTCGCAAGGTCTATGGAGTGGCCCCCAGCGCCATGCTTCTGGAGGAAGTTTCGCTCAAATCCGGCTTCACGGTAAAATCGCACGAAAGCCCGGAGGAAGCACCCGGCCCCTCTCCTGCCGCCAGAAAGAGGGCCTCCACCTCGGCGGAAAGAAGGGATCTGGGATAG
PROTEIN sequence
Length: 347
MQDWVKILRVRKNAIRLNANLASSIAHCAPLDAVGWNFRCVQCHVATGTYPSGFGYGWHSHDEYQLEIAVAGAFEFITAKSERIVVRPGRALVIPWKMAHRWKCIKPGVMVGISLELLPTPESIHRDGWLIEDIRQVASTSIKLKVDDLIKAGLDIRHPSFHSKIVACRLFLLLVEILEALLPAKRTGMDMTTKIAATVRGREVAGWVVRHIDEHLGADISLIQIAREVGMSTRHLHRLFLKHVGKSLHDYLLDRRLEHSRKLLTENGGKMQIKEIAFTCGFNSLAYFSNSFRKVYGVAPSAMLLEEVSLKSGFTVKSHESPEEAPGPSPAARKRASTSAERRDLG*