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SCNpilot_cont_1000_p_scaffold_8299_5

Organism: SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 5 ASCG 14 / 38
Location: 2084..3466

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2Z9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 451.0
  • Bit_score: 600
  • Evalue 1.70e-168
  • rbh
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EDY19110.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 451.0
  • Bit_score: 600
  • Evalue 2.30e-168
atoC; DNA-binding response regulator, NtrC family (contains REC, AAA-type ATPase, and DNA-binding Fis domains) similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 450.0
  • Bit_score: 515
  • Evalue 1.30e-143
  • rbh

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1383
ATGGCACGGCGAGGCACCCTGCTTATTGTTGACGACGAGAAAAACACCCGCGATGGCCTGCGGGTGGCGCTCGAGGATACCTTCGAGGTCTATGTCGCGGGCGACATCGCCGGAGCCATGTCGATCCTGGAAACCGATCCGGCTGACGTACTGATCACCGACCTTCGTCTCGGCGGCGAGGACGGCATGGCCCTCATCGAGAAAGCCCTCAAGCTTCCCAAGCCGCCCGTCTGCATCATGATGACGGCCTATGGCTCAGTCGACACCGCAGTCGAGGCCATGCGCCGGGGCGCCTATGACTTTGTGACCAAGCCGGTCAACATCGACCGTCTGGAGATCCTCATCCAACGTGCTCTGCGTGAGCGGGATACGCGCAAGGAAAACGAGGAGCTCCGCCAGCAGGTCGAGAAGCGCACAGGACTCGAAAACATGATCGGGCAATCCACCGCGATGGTCGAGGTCTTCGAAACGATCAAGCAGGTCGCTCCCTCCCGCGCCACGGTCCTCATCCAGGGAGAAACCGGCACGGGAAAGGAACTCGCCGCCCGGGCCATTCACCAGCTAAGTCCTCGCGCAGGTAAAAAATTCGTCACAGTCCACTGCAAGGCATTCTCATCGCAACTCCTTGAAAGCGAGTTATTTGGTCATGAGAAAGGCGCTTTCACCGGTGCGTTCGAACGGCGCATCGGGCGCTTCGAGCAGGCCAGCGGCGGCACACTCTTCCTCGACGAAATCGGGGAAATCGACGAGAATACCCAGGTGAAGATCCTGCGCGCCATCGGCGAACGCACCTTTGAACGCGTCGGTGGCAACCAGACCATTCAAACTGACGTCCGTCTCGTGGCCGCGACCAATAAGGATCTCGCCAAGCTCGTCTCCGAGGGAAAATTCCGCGACGACCTCTATTTCCGCCTCAACGTCGTGCAGCTCACGATGCCTCCCCTGCGCTCACGCAAGGAGGATATCCCCCTCCTGGCCCAATCCTTCCTCAAGGAATCCGCCAGGGAAAACGGCAAACCCTTCCGGGATCTTTCCCCCGAAGCAGCCGCCTGCATCATTCACTACGACTGGCCGGGCAATGTCCGCGAACTCCGCGCCGCCGTGGAACACGCCGTCGTTATGTGCGGCACCCCCCGTATCGGCGTACGGGACTTGCCCGCCTCGGTAAGGCAGGGAATTCCCTCGATTATGCCTTTGGTCGAACAGCCTCATGCATCTGGTCGATTAAATTTGCACCAAACCGAACAGGCACTTATTTTCCGCGCTCTGGAAGAGTGCGGCGGCAATCGGACCGAAGCAGCCAGGCGGCTGGGAATCAGCCGCCGAACGCTTCATCGAAGGCTGCGCGACCTGAAAATTACCAACCCACCGACGACCCAATAG
PROTEIN sequence
Length: 461
MARRGTLLIVDDEKNTRDGLRVALEDTFEVYVAGDIAGAMSILETDPADVLITDLRLGGEDGMALIEKALKLPKPPVCIMMTAYGSVDTAVEAMRRGAYDFVTKPVNIDRLEILIQRALRERDTRKENEELRQQVEKRTGLENMIGQSTAMVEVFETIKQVAPSRATVLIQGETGTGKELAARAIHQLSPRAGKKFVTVHCKAFSSQLLESELFGHEKGAFTGAFERRIGRFEQASGGTLFLDEIGEIDENTQVKILRAIGERTFERVGGNQTIQTDVRLVAATNKDLAKLVSEGKFRDDLYFRLNVVQLTMPPLRSRKEDIPLLAQSFLKESARENGKPFRDLSPEAAACIIHYDWPGNVRELRAAVEHAVVMCGTPRIGVRDLPASVRQGIPSIMPLVEQPHASGRLNLHQTEQALIFRALEECGGNRTEAARRLGISRRTLHRRLRDLKITNPPTTQ*