ggKbase home page

SCNpilot_cont_1000_p_scaffold_32934_2

Organism: SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 5 ASCG 14 / 38
Location: comp(389..1405)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IN10_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 336.0
  • Bit_score: 364
  • Evalue 8.70e-98
  • rbh
Alanine racemase {ECO:0000313|EMBL:AHF92843.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 336.0
  • Bit_score: 364
  • Evalue 1.20e-97
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 30.7
  • Coverage: 345.0
  • Bit_score: 115
  • Evalue 2.90e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Opitutaceae bacterium TAV5 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1017
GTGGGAACGGTGAGTCGTGTCCTGAATGGGCATCCGAACATCACGCGGAAGAATCTCGAGCGGGTGCAGAAGGCGATTGCGGATCTGCAATACGAGAAATGCCGTTCTGCTGAGATGTTGGTTTCGCGTCGCAATGGTTCCCGTGTGCAAACAGGCAATATCGGAATGGTTTACACGGAGATGGCGGGAGATTGGTCCAATCATCCTCTTGTGGCGGCGTATTCCATGGGTGTTGAGCGGGCGTGTCGCGAAAAGGGCTTTCACGCCTTGATCGAGTTTTGCGGAGATAATCAAGGCCTGCCGCGTTGTGTGAGGGACGGCAAGGTGGACGGTCTGCTGGTTAAGGCGACTCGCGGTTTGCCAGAGTATCTCGCCGATCTCCCCAAGGATTTTCCCGTGGTCTGTGTCGGTCTCAACGAGCCGACGGCGCATGTCCAGCAGGTGGCTCCCGATAATCGCGGTGCTGGCTGGATGGTGGTGGATTACCTGTGGGGTGCCGGGCACCGAAGGATCGGTTTTGTATGCAACGACCTCATGCACCCCATGTTCCTGGCTCGCTTTCAGGGTTATGAGGGCGCGCTGCGGTCCCGGCGGGCCTTTGATCCAGCGCTCTGCGCTCTGGATGAGGTTGATCTGGTCGACAGGGTGCCCGAGCTTTGCCCGCCGAACATGACTCAGGCGGTGGAGAGGCTCCTTGCTGCTCCCGGCGAGCCGGTGACGGCCATCGTGGCTGCCAATGATTGGATGGCTCAGGGCGTGTACGGCGCGCTGGAGAGGCTCGATCGGCGGGTCCCGGCCGATATTAGCGTAGTCGGTTTTGATAATGCCGTGCAGGTCTGCGCCTCGCTTTCGCCTCAGCTGACCAGCTTTGCGATTCCTTTTGGCGACGTAGCCTACGCTGCTGCGCTGCGGGTGATCGAGAAAATCCGGGTGGCCGACTCGCTCTGGGATCATTCTTTGCACCTGGTGCGTGGCGAAATTGTAGAGAGAGCATCCGTCGCTGATCTCTCCGCTTAG
PROTEIN sequence
Length: 339
VGTVSRVLNGHPNITRKNLERVQKAIADLQYEKCRSAEMLVSRRNGSRVQTGNIGMVYTEMAGDWSNHPLVAAYSMGVERACREKGFHALIEFCGDNQGLPRCVRDGKVDGLLVKATRGLPEYLADLPKDFPVVCVGLNEPTAHVQQVAPDNRGAGWMVVDYLWGAGHRRIGFVCNDLMHPMFLARFQGYEGALRSRRAFDPALCALDEVDLVDRVPELCPPNMTQAVERLLAAPGEPVTAIVAANDWMAQGVYGALERLDRRVPADISVVGFDNAVQVCASLSPQLTSFAIPFGDVAYAAALRVIEKIRVADSLWDHSLHLVRGEIVERASVADLSA*