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SCNpilot_cont_1000_p_scaffold_1952_16

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(15109..17439)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 822.0
  • Bit_score: 622
  • Evalue 7.40e-175
Ribonuclease E and G domain-containing protein; K08300 ribonuclease E [EC:3.1.26.12] similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 833.0
  • Bit_score: 619
  • Evalue 1.10e-174
Ribonuclease E n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QXC4_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 822.0
  • Bit_score: 622
  • Evalue 5.30e-175

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Taxonomy

Labrenzia alexandrii → Labrenzia → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2331
CCCCTGGACGCCGCGCCGGAAGGCGAAACCTCCGGGGCCGAGGACGGCGCCCGGGGTGACGCGGACGAGGACGAAGACGAGGTCTTCGACAACCAGAAGGGCCGTCCGGCCATTGCCGAGGAGGCATCCGAAGATGTCTCCGAAGACGACGACGAAAATACCGCCCTCGTCAGCAAGACCGAAGCCGCCGCGGCGGACCTGGCCGATTATCGCGACGACGGCGAAGTGGCCGCCGCCGGGGCCGCCGAGGAGAATGAGGGCGAGATCGAGCCGGTCAGTCCCCACCCCTCGCCCGAACAGGCGGTGGGCGATTTCGCCGGCGAGAATGCGGGCGAACAGGCGGCCGAAGCCGCCGCCGAAGGCGAAACCGCCGACGCCCAGGCCCTGCACGCGCCCCGCCCGCCGCAGAAATGGGTGCGCAAGAAGCACTACAAGATCCAGGAAGTCATCAAGCGCCGCCAGATCATCCTGGTCCAGGTGGTCAAGGAGGAACGCGGCAACAAGGGCGCGGCGCTGACCACCTATCTGTCGCTGGCGGGCCGTTATTGCGTGCTGATGCCCAATACCCCGCGCGGCGGCGGCATTTCCCGCAAGATCACCAACGCCGCCGACCGCAAGCGCCTGAAGTCGGCCGCCCAGGGGCTGGACCTGCCCGAGGGCATGGGCCTGATCATCCGCACCGCGGGCGAGAACCGCACCAAGCTGGAGATAAGGCGCGACTATGAATATCTGGTGCGGCTGTGGGACACGATCCGCGAAAAGACGCTCAGTTCCAACGCGCCGGCCTGTGTCTATGAAGAAGGTGACCTGATCAAGCGGGTGATCCGCGACCTTTATACCAAGGATGTCCAGGACATCGTGGTCGAGGGCGAGGAAGGCTATCACAACGCCCGGGAATTCATGCGCATGCTGATGCCCAGCCATGCGCGCAATGTCCACCATTACAAGGACAAGGCGCCGCTGTTCCAGCGCATGCATATCGAGGCCCAGCTCGATTCCATGTTCTCGCCCACCGTCACCCTGAAGTCCGGCGGCTATATCGTCATCAACCAGACCGAGGCGCTGGTTTCCATCGACGTCAATTCGGGCCGCGCCACCCGCGAGCATTCGATCGAGGAGACGGCGCGCAAGACCAACCTGGAAGCCGCCGCCGAGATCGGCCGCCAGCTGCGCCTGCGCGACCTGGCCGGGCTGATCGTGATCGACTTCATCGACATGGAGGAAAGCCGCAACGACCGCGAGGTCGAACGGCGCCTGCGCGATGCAGTCAAGAACGACCGCGCCCGCGTGCAGATCGGCAAGATCAGCCAGTTCGGCCTCATGGAAATGAGCCGCCAGCGCCTGCGCGCCGGCGTCATCGCCGGCTCCACCATTACCTGCCCGCACTGTGCCGGCATGGGCATCGTGCGTTCGGTGGAATCCACCGCGCTGCGGCTGCTGCGCGCGCTGGAGGAGGAAGGCGAAAAGAACCGCTCGGCCGCCGTCACCGTCAAGATCGCCAATGACGTGGCCCTCTATGTGCTGAACCAGAAGCGGCATGAGCTGGACCGCATCGAGACCGAGCACGAAATGGAGATCGTCTTCGTGCCGTCCGAGGGCATGGCCGTGGGCACCTTCGAGATCGAACGTACGCGCCAGCGCAATCCGGCCGACCGGCCGCGCCAGCCGCTGGCAGTGGGCATCGAGGCAGGCTTTGCGCCTTCCGACGAGCCGGAGATCGCGCCGGAGGAACAGCCGGAAGAGGAAGAGCCCGAAGAAGAGGACGAAGAAGAAGAGGTCCAGGAGGCCCAGCCCGAGGTCGAGGGCGCCGAGGCCCAAGCCAGGGCTGAGAGCGAGGGCACCACGGGCGAGAATGGCGAACAGCGCGGGGGCCGCCGCTCGCGCTGGCGCAGCCGCCGCCGTGGCCGCCGCGGTGGGCGCCGCCGCAACCAGCCGAACCAGGGTGAAGAGCCGGGTGCCGAAGCCCAGGGCCAACAGGATCAGGGCGACCAGAATCGGACCGAGACAGTCGGCGGCGACATCGCAGGCAGCCAGCACGGCCGGAGGGACGGGGGCGACCAGCCCCCGCAAGAGAGCACGCGTACTGAACGGGCGCCGCGCGACCGGGGCGGCAGGGCGCGCCGCGCCGTTTCCGAAACCGACCGTTTCGGGTTGATCCCCGACGAGATCGACACCACGCCCAGCGAAACGCCATCGGCACCCGGAAAACCTTCGGCGCCGGTCTGGTCGCTTAGCGACGATATTCCTGACACCACACCGTCCGAGGATGCCGCCGAAGCCCCCAAGCCGACGCGCAAGGGGTGGTGGCAGCGCACCTTCAGCGGCGAATAA
PROTEIN sequence
Length: 777
PLDAAPEGETSGAEDGARGDADEDEDEVFDNQKGRPAIAEEASEDVSEDDDENTALVSKTEAAAADLADYRDDGEVAAAGAAEENEGEIEPVSPHPSPEQAVGDFAGENAGEQAAEAAAEGETADAQALHAPRPPQKWVRKKHYKIQEVIKRRQIILVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTPRGGGISRKITNAADRKRLKSAAQGLDLPEGMGLIIRTAGENRTKLEIRRDYEYLVRLWDTIREKTLSSNAPACVYEEGDLIKRVIRDLYTKDVQDIVVEGEEGYHNAREFMRMLMPSHARNVHHYKDKAPLFQRMHIEAQLDSMFSPTVTLKSGGYIVINQTEALVSIDVNSGRATREHSIEETARKTNLEAAAEIGRQLRLRDLAGLIVIDFIDMEESRNDREVERRLRDAVKNDRARVQIGKISQFGLMEMSRQRLRAGVIAGSTITCPHCAGMGIVRSVESTALRLLRALEEEGEKNRSAAVTVKIANDVALYVLNQKRHELDRIETEHEMEIVFVPSEGMAVGTFEIERTRQRNPADRPRQPLAVGIEAGFAPSDEPEIAPEEQPEEEEPEEEDEEEEVQEAQPEVEGAEAQARAESEGTTGENGEQRGGRRSRWRSRRRGRRGGRRRNQPNQGEEPGAEAQGQQDQGDQNRTETVGGDIAGSQHGRRDGGDQPPQESTRTERAPRDRGGRARRAVSETDRFGLIPDEIDTTPSETPSAPGKPSAPVWSLSDDIPDTTPSEDAAEAPKPTRKGWWQRTFSGE*