ggKbase home page

SCNpilot_cont_1000_p_scaffold_1955_16

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(19692..20708)

Top 3 Functional Annotations

Value Algorithm Source
xylose isomerase; K03335 inosose dehydratase [EC:4.2.1.44] similarity KEGG
DB: KEGG
  • Identity: 27.4
  • Coverage: 274.0
  • Bit_score: 119
  • Evalue 2.00e-24
xylose isomerase n=1 Tax=Rudanella lutea RepID=UPI00036190EC similarity UNIREF
DB: UNIREF100
  • Identity: 30.2
  • Coverage: 325.0
  • Bit_score: 126
  • Evalue 5.20e-26
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACZ41195.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.4
  • Coverage: 274.0
  • Bit_score: 119
  • Evalue 8.90e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermobaculum terrenum → Thermobaculum → Bacteria

Sequences

DNA sequence
Length: 1017
ATGGACTTCGCATCCCCCTCCCGCAGGCGCTTTCTGAGCGGCGCCGCCGCCTTCGCCGGTGCCGCCACGATGAGCGCCACGCCGGCCGCCGCGGCGGGTGGAAAACTGCCCTTCCGCTATTCCTACAGCGCCATTTCCTGGGACACCAATGTCGAGGAAGCCATCCGGGTGGGCCACAAGCTGGGCTTTCCCGGCGTGGAGCCCTTCCGGCACAATGTGGTGAACTATCTGGGCCGCCCGCTGGCGCTGAAGAAGATCCTGGACGATGCCGGCATGCAGATGGCCACCTGTTCGAACGGCGGCGGGCCGGATTTCTCGGGCAATTTCTTTGACCCGGCCAAGGCGGCCAAGACGGTGGCCGACCACATCAAGTTCGCGCGCGAGTTCATCAAGCCCTTCGGCTATGTGAACCATTTCAAGATGAACATGGGCCCGCGCCCGCCGGGCTATGACACCAGCGACGACAACATCAAGCAGTGCGCCGAAAGCCTGAACAGGATCGGCATGGAGACGCTGAAGCTGGGCATCAGGCTGGCGCCCCATCCCCATGTCGGCTCGCTGGTGCAGAACCAGCATGAGGTCGACCTTCTGATGAAGGAGACCGATCCGCGCTATGTGTGGATGACGGCCGACACCGCCCATCTGGTGCTGGGCGGGCTGGACCCGATTGAGGTCCTGACCACCTATTGGCCGCGCATCGCCGAAATCCACTACAAGGGCGCGCCGACGAAGCTGAAGGGCAACCGCAAGGTGGCGGTGCCGCGCACGGGGCCGGAGTCGGGCGGCCACAACTGGTTCCGCAACATGAGCGGGCCGGATTCGGGCGGCGTCGATTTCCCCCGCATCCAGAGATATCTGGTCGAGAAGAACTTCAATGGCTGGGTGACGCTGGACTATGACGCCTCGATGATCCCCAAGGGCAGCACGATGGAAGCGGTGCTGGCCAAGGACAAGCAGTACATCATCAATGTGCTGAAGGTTGACCCCAAGGCGAATTTCACCAACGGCAGCGCCTGA
PROTEIN sequence
Length: 339
MDFASPSRRRFLSGAAAFAGAATMSATPAAAAGGKLPFRYSYSAISWDTNVEEAIRVGHKLGFPGVEPFRHNVVNYLGRPLALKKILDDAGMQMATCSNGGGPDFSGNFFDPAKAAKTVADHIKFAREFIKPFGYVNHFKMNMGPRPPGYDTSDDNIKQCAESLNRIGMETLKLGIRLAPHPHVGSLVQNQHEVDLLMKETDPRYVWMTADTAHLVLGGLDPIEVLTTYWPRIAEIHYKGAPTKLKGNRKVAVPRTGPESGGHNWFRNMSGPDSGGVDFPRIQRYLVEKNFNGWVTLDYDASMIPKGSTMEAVLAKDKQYIINVLKVDPKANFTNGSA*