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SCNpilot_cont_1000_p_scaffold_2138_6

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(7546..8967)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000360CFCB similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 478.0
  • Bit_score: 421
  • Evalue 1.40e-114
  • rbh
RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 466.0
  • Bit_score: 400
  • Evalue 6.30e-109
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ABQ69577.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 466.0
  • Bit_score: 400
  • Evalue 2.80e-108

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Taxonomy

Sphingomonas wittichii → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGAAAAAGCCCCTTGCTGCATTGATGGCATCGCTGCTGCTCAGCGCCTGCGTCGCCACCCCGCCCACCGATCCGCAGATTGCCCAGGTCAAGACCGAAAAGCTGGGCCTGGACGGCGCACCCATGGCGCCTGTGCCGGTAGCCTGGTGGAAGGCGTTCAAAGATCCCCAGGTCGACCGGCTGGCGCCGCAGGTAATCGCCAACAATCCCAGCCTGACGGCTGCCATGGCACGGCTGCGCGCCGCACAGGCGGAGCTTTCGGTCAACCAGGCGGAAGACATGCCGCAGGTGACGCTGGACGCCCAGGAACAACGGCTGCTGTTCAGCAAGGACTACATCATCCCGCCTCCTTATGGCGGATCGTACCGCTGGTATGGCCAGGTCCTGGGCAATTTCAGCTGGAACCTCGATTTCTGGGGCAAGCAGGCGGCGCTGATCGACAAGGCGCGCGGCACTGCACAGGCTGCGGCGCTGGATGTGGAAGCGGCGCATCTGGCATTGTCGGGTGGCTTTGCCCAGGCCTATATCGGTCTTCTCCTGAATTACCAGGACGGCGACATTGCCGACGCCACGGTGGCCGAGCGCGAGGGGATCGTGAAGATCACCCAGGGCCGCGTGGACGCGGGTCTGGAAAATGCCAGTGCCCTGGAACAGGCCAAGGCGCTGCTGTCCCTCGCCAGGGCCGACCAGCTGCGCTATCAGGCGGCGCGCGAGACCGACGTCCACGCGATCGCTGCACTGGCGGGCGAGGGCGCCAATGCCTATGCTGGCATCGTCAGGCCCACGCCCGATCTGGATGCGGCGCTGCCGCTGCCCACCCAGCTTCCCGCCGATCTTCTGGCACGGCGTCCCGACATCCTGGCGGCGCGGGCGCGGATCGATGCGGCCATGGCCGGGCGCAAGGCCGCGCACGCCGCCTTCTATCCCGACATCAATCTGGTCGCGATGGTGGGCTTCCAGGCCATCGGCCTGTCCAACCTGATCGGCGGCGATTCATTCACTTATGGAGCGGGGCCAGCTATCCACCTGCCGATCTTCGATGCCGGCAAGTTGCGCGCCGAATATGCCGGCGCCACGGCCCAGCTGGACGAGGCGGTGGCTGACTATAACGGCGCCGTGGTGAACGCCATCAAGCAGGCGGCCGACGCGATGACCCAGGTAAAAAGCCTGGAGCAGCAGCGCCTGCGCCAGCAGGAGGCGGTCCAGAGCGCCGGCCGCGCCTTCAAGATCGCGGAGGACCGCTATCGCAGCGGGCTTTCCACCCAGCTACCCATGCTTCAGGCGGAAGCCACGCTGCTGCAGGCGCGCCAAGGGCTGGCTGCCGTCACCGCCCAGTCGACCATCCAGCGCATCACCCTTCTTCTGACCGTGGGTGGGCCCTTCGCCGCGCCCGATACCACCAAGATTGCCAAGCAGGATTGA
PROTEIN sequence
Length: 474
MKKPLAALMASLLLSACVATPPTDPQIAQVKTEKLGLDGAPMAPVPVAWWKAFKDPQVDRLAPQVIANNPSLTAAMARLRAAQAELSVNQAEDMPQVTLDAQEQRLLFSKDYIIPPPYGGSYRWYGQVLGNFSWNLDFWGKQAALIDKARGTAQAAALDVEAAHLALSGGFAQAYIGLLLNYQDGDIADATVAEREGIVKITQGRVDAGLENASALEQAKALLSLARADQLRYQAARETDVHAIAALAGEGANAYAGIVRPTPDLDAALPLPTQLPADLLARRPDILAARARIDAAMAGRKAAHAAFYPDINLVAMVGFQAIGLSNLIGGDSFTYGAGPAIHLPIFDAGKLRAEYAGATAQLDEAVADYNGAVVNAIKQAADAMTQVKSLEQQRLRQQEAVQSAGRAFKIAEDRYRSGLSTQLPMLQAEATLLQARQGLAAVTAQSTIQRITLLLTVGGPFAAPDTTKIAKQD*