ggKbase home page

SCNpilot_cont_1000_p_scaffold_3605_7

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(8369..10873)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002FA9EE4 similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 879.0
  • Bit_score: 785
  • Evalue 5.10e-224
TonB-dependent receptor-like protein {ECO:0000313|EMBL:KGB58508.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 838.0
  • Bit_score: 767
  • Evalue 1.50e-218
TonB-dependent receptor-like protein similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 851.0
  • Bit_score: 727
  • Evalue 6.70e-207

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2505
ATCGACGTCAACACCATTCCGCAACAGCTTGTGAAGCGCGTTGACGTGGTCACGGGCGGCGCCTCGGCCGACTACGGCTCTGACGCGGTGGGCGGCGTGGTGAACTTCATCCTCGACAAGGACTATACCGGCCTGAAGGGCAGCATGCAGTACGGCGAGACGTACAATGCCCTGCGGCCCAACTATAAGGCCAATCTGACTTATGGCGGTGACTTCCTGGGCGGCAAGGCGCACTTGCTGGTGTCGGGGGAGTGGACCCAGATCCAGGGGATTTATGACTATAACCCGAAGTGGAATCAGCAGGGCTATTTTCGAGTCCAGAACCCCGCCTATACGGCGACCAATGGTCAGCCCTTCTATCTGATCCAGAAGGGCATCGGCTCCAGCCAGGTGGCGCCAGGCGGCCTTGTCCTGAATTCGGTGACCACGGGGGGCGCAAATTCGAGCCTGCTCCGGGGAACCTATTTTGGCGTCAACGGCGCCGTCAACAACCTGGCTTACGGCACGGTGACGGGCCCGTGGATGATCGGCGGCGATACCGCGGTCACCCAGGACAATTATGGCGGCACCAGCTCGCTGGCTGCCGGCGAAAACCGCGAAAGCCTTTATGGCCGGGGCAGCTATTACATCACCCCGGACATCGAACTGTGGGTGGAAGGTTCGGTCACCCGCTACAAGGGGCGCAGCTATTACATGCAGCCTCCCCAGTATCCGGGCATCGCCATCAAGGCCGACAACGCCTTCCTGCCGCAAAGCATCCGGGACTACATGGCGGCGAACAATCTGGCCTCGCTCAACATGGGTTCGACCAATGCGGGCTTTCCCAAGTCGGGCAGCCGCAACGGCCGCGAGGCGCAGCGCTTCGCCGCCGGTGCAGACGGCACCACCAATCTGTTCGACACCGACTGGACGTGGGATCTTTTCGCCCAGGCGAGCATGACCAACACCCGCGAACAGGAAACCCCGCTGTGGAATTCTTCCAAGCTGGCCCTGGCTCAGGACGCGGTGTTCGCCCCGGCCGGCAACGCCCTGGGCGTGCCGGCCGGCACCATCGTGTGCCGCAGCAGCCTGACAAGCCCGTCGAACGGCTGTTCGCCACTGTCGCGCATCGGTATCGATGGCGGCATGCAGAGCGCGGCGGACTTCCAGAAAGGCCTGGGCTATGTGCTGGGCACGCCCTACCGCCTGCAGCGCCTGAACGAGCAGGTCTATGGCTTCAACGTGTCGGGTGACCCGATCCAGGACTGGGCCGGTCCGATCTCCATCGCCTTCGGCGGCGAATGGCGGCTGGAGTCAATCAACGGTTTCGTTCCGACCCCATATCAGTCGGGCTGGCTGTTCGGCAACTACCTGGTCACCCAGGGTCACTATTCGGTGGCAGAAGGATACCTGGAAACGGTGGTTCCGCTGGCCGAAGGGCTCGATGTCAACGGCGCTATCCGCTACACCGCCTACAGCACGTCAGGCGGCGTCAACACCTGGAAGTTGGGTGCCAACTACCAGCCGATCGACGACGTCAAGTTCCGCGCCACCTATTCGCACGACATCCGCGCGCCCAACCTGAGCGAGCTGTTCGCCACGGGCACCCGGCGTACCAATACGGTGGTGATCAACAATACTTCCTATACCTTCATCCAGAACCAGACGGGCAACCCCCTGCTGAACCCGGAGGCGGCCAACAGCCTGGGTGCCGGCGTCGTCCTGACTCCGAGCTTCATTCCCGGCCTGGCGGCTTCGATCGACTACTTCAACATCAACCTGAAGGGCTCGATCGGCACGATCTCGGCGCAGGACGTGACGGATCTCTGCTACGTCCAAAGCATCGGGAACTACTGTCCCAACATCAACTGGTCGGATGGTGTGGTGCGCGGTCCGGGCAGCGTGGGTTCGGCGATCAACTTCATTCAGTTGAAGCCCATCAACTTTGCCACGCAGAAGCAGGAAGGCATTGACTTCGACGTCACCTACCAGGTGCCGCTGGACGCCCTCAACTGGTTCGGCGAGATCCCCGGTGATCTCACCCTCAACGCCCTGGCGACGACCTATCTGCGTGCCTACACCAACAACGGCATTGCCCCGCCTACCGATGCAGCGGGCACCAATACCGGCGGCACGCCGGACTGGTCGTACCAGGTCAGCGCGACCTATCACACCGATCCCTGGACCTTTTTCCTCCTGGGACGCGGCGTGAGTGCGGGCAAATACGCCAACGAGTGGATTGTCTGCACGACCGGTTGCCCGACCTCTACGCTGGCGCATCGCACGTCGAACCTAAACAGCATCGATGGTGCGTTCTACATGGACAGCTCCATCACCTACTCGTTCGTGGCGTGGGATTTCGACAGCGAGGCATATTTCTCGGCGAAGAATATCTTCAACACCAGCCCGCCGCTGGTGGGCAACGGTCCGGACGGCAACAATACGCCGGCCTATCCGAATACCAACCGTGCCCTCTACGACTATCTGGGCCGGGTTTACACCGTCGGCCTGCGGTTCAAGATGTAA
PROTEIN sequence
Length: 835
IDVNTIPQQLVKRVDVVTGGASADYGSDAVGGVVNFILDKDYTGLKGSMQYGETYNALRPNYKANLTYGGDFLGGKAHLLVSGEWTQIQGIYDYNPKWNQQGYFRVQNPAYTATNGQPFYLIQKGIGSSQVAPGGLVLNSVTTGGANSSLLRGTYFGVNGAVNNLAYGTVTGPWMIGGDTAVTQDNYGGTSSLAAGENRESLYGRGSYYITPDIELWVEGSVTRYKGRSYYMQPPQYPGIAIKADNAFLPQSIRDYMAANNLASLNMGSTNAGFPKSGSRNGREAQRFAAGADGTTNLFDTDWTWDLFAQASMTNTREQETPLWNSSKLALAQDAVFAPAGNALGVPAGTIVCRSSLTSPSNGCSPLSRIGIDGGMQSAADFQKGLGYVLGTPYRLQRLNEQVYGFNVSGDPIQDWAGPISIAFGGEWRLESINGFVPTPYQSGWLFGNYLVTQGHYSVAEGYLETVVPLAEGLDVNGAIRYTAYSTSGGVNTWKLGANYQPIDDVKFRATYSHDIRAPNLSELFATGTRRTNTVVINNTSYTFIQNQTGNPLLNPEAANSLGAGVVLTPSFIPGLAASIDYFNINLKGSIGTISAQDVTDLCYVQSIGNYCPNINWSDGVVRGPGSVGSAINFIQLKPINFATQKQEGIDFDVTYQVPLDALNWFGEIPGDLTLNALATTYLRAYTNNGIAPPTDAAGTNTGGTPDWSYQVSATYHTDPWTFFLLGRGVSAGKYANEWIVCTTGCPTSTLAHRTSNLNSIDGAFYMDSSITYSFVAWDFDSEAYFSAKNIFNTSPPLVGNGPDGNNTPAYPNTNRALYDYLGRVYTVGLRFKM*