ggKbase home page

SCNpilot_cont_1000_p_scaffold_3655_5

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(3186..4007)

Top 3 Functional Annotations

Value Algorithm Source
Glycosyl transferase, family 25 n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JVG0_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 258.0
  • Bit_score: 166
  • Evalue 2.80e-38
Glycosyl transferase, family 25 {ECO:0000313|EMBL:EBA02342.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC2150.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 258.0
  • Bit_score: 166
  • Evalue 3.90e-38
lipooligosaccharide biosynthesis protein lic2B; K07270 glycosyl transferase, family 25 similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 251.0
  • Bit_score: 137
  • Evalue 5.70e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodobacteraceae bacterium HTCC2150 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGGCGGGCGCGGGGCGAAAATGCTACCCCCCGCGGGCGATGCGGCTTTACCTGATCAACCTGGACCGTCGTCCCGACCGGCTGGCCGTCATGGCGTCCCAGGCGGAAGCCCTGGGCCTTGGCCTGACCCGCATCCCGGCGGTGGACGCGATCTTTGCCGATCCGGCGGAACTGGATCGCCGGTTCGCCCATAATGGCCCCCTGGGGGAGATTCCGCGCGGCGACAAGGCATGCTTTCTCTCCCACCGCCGCGCCTGGGAAGCCTTCCTGGCGACGGATGACGCCCATGCCGTGGTGCTGGAGGACGATGTGCGCCTGTCGCCAGTGGCGGGCGCGCTGCTGGCCTCCGATGCCTGGGTTCCCGCCGGCATCGGGCTGGTCAAGCTGGAGCATTATGGCCCCAGGGGCCAGCGGGTGCTGCTGACCGATTTCCGCCAGGCCGGGAAGGATTTCAAACTGGCGCGGATGCTGTCGCGGCACACCGGGGCGGCCGCCTATCTGATCGCGCGCCCCGCTGCCGAATTGCTGCTGGCCGGGCGCCGCTTCGACCTTCCGGTCGATCACCTGATGTTCAATCCCAACAACTCCGAACTGTTCGCGCGGCTGGCGCCTTGGCAGCTTTTGCCCGCCATTGCGCGCCAGCGGGAATTCGTCGGCGAGAAATCGGACATCGAAGGCACGCGCAGGCCGCTTCGCAAGCTGACCCTGACTTACGCGCGGCGCGAACTGGTGCGCCTCGGCTATGACCTGAAGCTGGTGCCCCGGCAGCTGGCGGCGCTGGCAGGCGGGGCGAAATTCACCGCCATGGAAACCGCCGATTAG
PROTEIN sequence
Length: 274
MAGAGRKCYPPRAMRLYLINLDRRPDRLAVMASQAEALGLGLTRIPAVDAIFADPAELDRRFAHNGPLGEIPRGDKACFLSHRRAWEAFLATDDAHAVVLEDDVRLSPVAGALLASDAWVPAGIGLVKLEHYGPRGQRVLLTDFRQAGKDFKLARMLSRHTGAAAYLIARPAAELLLAGRRFDLPVDHLMFNPNNSELFARLAPWQLLPAIARQREFVGEKSDIEGTRRPLRKLTLTYARRELVRLGYDLKLVPRQLAALAGGAKFTAMETAD*