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SCNpilot_cont_1000_p_scaffold_5832_7

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(6212..6415)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, Fis family transcriptional regulator n=2 Tax=Rhodospirillum rubrum RepID=G2T9J8_RHORU similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 58.0
  • Bit_score: 76
  • Evalue 1.60e-11
two component, sigma54 specific, Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 58.0
  • Bit_score: 76
  • Evalue 5.10e-12
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABC21344.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 58.0
  • Bit_score: 76
  • Evalue 2.30e-11

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Taxonomy

Rhodospirillum rubrum → Rhodospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGCGTCTTCTCATCGTCGGCGGCCTTTCGGGCCAGATCGGCCTGGCCACCAGGATTGCGATGGACAGGGGGGCCAAGGTCACCCATGCCGGCAGCATCGACCAGGCGCTGGCGACCCTGCGTGGCGGGGCGGGCGCGGACCTGGTGTTCTGCGATGTGGGGCTGGAGAGGAATATCTGCCCCTGCCCGCCGATCCCGAACTGA
PROTEIN sequence
Length: 68
MRLLIVGGLSGQIGLATRIAMDRGAKVTHAGSIDQALATLRGGAGADLVFCDVGLERNICPCPPIPN*