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AMDSBA4_3_13

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: 12416..13165

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 241.0
  • Bit_score: 262
  • Evalue 1.30e-67
Macrolide-specific efflux protein MacB n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L5H8_9BACT (db=UNIREF evalue=2.0e-58 bit_score=231.5 identity=52.7 coverage=88.4) similarity UNIREF
DB: UNIREF
  • Identity: 52.7
  • Coverage: 88.4
  • Bit_score: 231
  • Evalue 2.00e-58
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=10 to=238 evalue=3.6e-101) iprscan interpro
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Syntrophothermus lipocalidus → Syntrophothermus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 750
ATGATTCAAGACATCAATCACCCAATTATTGAAACACATCAATTACGCCGTCGCTACGGGCGGGGAGATGCCGCGATGGATGGATTGGCGGGAGTGGATTTGACTGTTAGACGCGGCGAGATGGTCGCCTTGATGGGCCCATCGGGAAGTGGCAAATCAACATTAATGCAAATTTTAGGGTTGCTGGACCGTCCAACTTCTGGAAGCTACTATTTGAATGGTACCGATGTGAGCCGACTCACAACGGCAGAGCAGGCCGAATTGCGAGGTCGGCGCTTAGGCTTTGTATTTCAAGGGATCTATTTGCTGCCGCGTCTCAATGCTATCCGTAATGTGGAGTTGCCCATGGTGTATGCAAGGTTTCCTGCTAATGAAAGAAAACATCGCGCTTTAGAAAGTCTTTCTCGGGTGGGTCTCGCTGAATTGGCAAATCGGCGCCCTAACCAACTATCCGGCGGTCAGGCGCAAAGGGTCGCAATCGCCCGCGCAGTAGCTCCAGGACCAGATTTGTTGCTAGCGGACGAACCCACTGGAGCTTTGGATCGCGCATCCGGCCGTGAGGTCCTAGCGCTATTTCAATACCTCAATGACGACCTGGGTCTAACTATTGTTATCGTCACCCACGATCCCTTGGTAGGGCGGCACGCAAGACGAATCGTGGAACTTGAAGACGGTCGCATTATTTCCGATACCCCGGTGAATGAGAAAGACAGAATCGTCGCAGAGCATCCCCTGGAGGTGATTCGATGA
PROTEIN sequence
Length: 250
MIQDINHPIIETHQLRRRYGRGDAAMDGLAGVDLTVRRGEMVALMGPSGSGKSTLMQILGLLDRPTSGSYYLNGTDVSRLTTAEQAELRGRRLGFVFQGIYLLPRLNAIRNVELPMVYARFPANERKHRALESLSRVGLAELANRRPNQLSGGQAQRVAIARAVAPGPDLLLADEPTGALDRASGREVLALFQYLNDDLGLTIVIVTHDPLVGRHARRIVELEDGRIISDTPVNEKDRIVAEHPLEVIR*