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AMDSBA4_19_18
Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
rluB; pseudouridine synthase similarity KEGG
DB: KEGG
54.5 292.0 312 9.50e-83 say:TPY_1560
Pseudouridine synthase n=1 Tax=Desulfotomaculum ruminis DSM 2154 RepID=F6DT72_DESRL (db=UNIREF evalue=2.5e-49 bit_score=201.4 identity=41.0 coverage=95.53264604810997) similarity UNIREF
DB: UNIREF
41.0 95.53 201 2.50e-49 say:TPY_1560
PSI_RSU (db=PatternScan db_id=PS01149 from=102 to=116 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) iprscan interpro
DB: PatternScan
null
null
null
0.0 say:TPY_1560
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600:SF2 from=7 to=236 evalue=9.5e-61) iprscan interpro
DB: HMMPanther
null
null
null
9.50e-61 say:TPY_1560
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600 from=7 to=236 evalue=9.5e-61) iprscan interpro
DB: HMMPanther
null
null
null
9.50e-61 say:TPY_1560
TIGR00093: pseudouridine synthase (db=HMMTigr db_id=TIGR00093 from=69 to=228 evalue=1.9e-53 interpro_id=IPR000748 interpro_description=Pseudouridine synthase, RsuA/RluB/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) iprscan interpro
DB: HMMTigr
null
null
null
1.90e-53 say:TPY_1560
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=61 to=237 evalue=3.4e-42 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
null
null
null
3.40e-42 say:TPY_1560
(db=HMMPfam db_id=PF00849 from=65 to=196 evalue=1.4e-18 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMPfam
null
null
null
1.40e-18 say:TPY_1560
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=2 to=59 evalue=2.4e-11) iprscan interpro
DB: superfamily
null
null
null
2.40e-11 say:TPY_1560
(db=HMMPfam db_id=PF01479 from=3 to=38 evalue=1.1e-09 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
null
null
null
1.10e-09 say:TPY_1560
no description (db=HMMSmart db_id=SM00363 from=3 to=62 evalue=2.5e-07 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart
null
null
null
2.50e-07 say:TPY_1560
S4 (db=ProfileScan db_id=PS50889 from=3 to=71 evalue=13.063 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
null
null
null
1.31e+01 say:TPY_1560
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. UNIPROT
DB: UniProtKB
54.5 292.0 312 4.70e-82 F8I594_SULAT