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AMDSBA4_20_21

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(18190..18792)

Top 3 Functional Annotations

Value Algorithm Source
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 192.0
  • Bit_score: 206
  • Evalue 8.60e-51
Regulatory protein TetR n=2 Tax=Sulfobacillus acidophilus RepID=G8TTV0_9FIRM (db=UNIREF evalue=9.3e-51 bit_score=205.7 identity=54.7 coverage=94.5273631840796) similarity UNIREF
DB: UNIREF
  • Identity: 54.7
  • Coverage: 94.53
  • Bit_score: 205
  • Evalue 9.30e-51
(db=HMMPfam db_id=PF00440 from=11 to=57 evalue=9.1e-14 interpro_id=IPR001647 interpro_description=DNA-binding HTH domain, TetR-type GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.10e-14

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 603
ATGGAGGCTTCCCCCTCCACCCGCGACCACATCATCCAAGGAGCACGCGTGGTCTTTGCGGAAAAAGGATTTCGAGCTTCAATGCGCGACATTGCCCGCGCAGCGGGCATTTCCACCACCAGTTTGATTTTTTGGTACTTTAAAGACAAAGAGGCCTTGTTTTTAGCAGTCGTAGAAGACTCGTCTCCCTTATCTCAAGCTCAACAACTGCTCACCGCCATGTCCAATACAGTCTCTAGCGCTGATATTATTCGCCATCTGGTTCACGTCTATTACAATGTTTATGGGGATCCCTTAAACCGCCAAATCTTATTCCAAATGTTATCGCATACCACGTGGCATCCCAAAATTTCCACCCTGTTAAAGACTCAGTTAAGCGACGTTACGGCTGGCCGAATGGTTGCCGTCATTGTCGCTGGACAAAATTCCGGAGAATTCCGTCGTGACCTGGCGCCTGATTTCGCAGCCCAAGCAGTGCTGGGCATTCTCTTTGCCTTGGTAACCCGATGGCATGTTGACGGCCATAGCCCTTGGCCCGAGCAGGAGGTCGCGGATGATATCTTAACCATGTTGGGATATCAAATACAAGACCCGTCTGAGTAA
PROTEIN sequence
Length: 201
MEASPSTRDHIIQGARVVFAEKGFRASMRDIARAAGISTTSLIFWYFKDKEALFLAVVEDSSPLSQAQQLLTAMSNTVSSADIIRHLVHVYYNVYGDPLNRQILFQMLSHTTWHPKISTLLKTQLSDVTAGRMVAVIVAGQNSGEFRRDLAPDFAAQAVLGILFALVTRWHVDGHSPWPEQEVADDILTMLGYQIQDPSE*