ggKbase home page

AMDSBA4_27_27

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: 33017..33466

Top 3 Functional Annotations

Value Algorithm Source
Putative DNA-binding domain (db=superfamily db_id=SSF46955 from=6 to=136 evalue=1.2e-18 interpro_id=IPR009061 interpro_description=DNA binding domain, putative GO=Molecular Function: nucleotide binding (GO:0000166)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.20e-18
no description (db=HMMSmart db_id=SM00422 from=7 to=79 evalue=1.2e-15 interpro_id=IPR000551 interpro_description=Transcription regulator HTH, MerR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.20e-15
no description (db=Gene3D db_id=G3DSA:1.10.1660.10 from=7 to=139 evalue=1.3e-14) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.30e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_CHLX_70_13_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 450
ATGACAGAAGAGCGGCTTCTGCATATTGGAGAAATTGCCACGGAGTGCGGGACCACCACACGGACCCTTAGGTATTATGAGGATCTTGGGCTTATCGGGCCAGCCATGCGGGAACGGGGCAACGGCAGTTTCCGCTTATATCGAGTCGAAACCGTGGAACGCGTTCGCCAAATTCAGGAGCTCAAAGATCTTTTAGGGTGGTCCCTTGACGATATTAGACTGCACTTTCAAGTAGAAGATGAGGTTAAGCGAATGCGCGAGGCATTTCATCGGACTACCTCCACGATAGAAAAGCAACAAATTCTCATTGAAGCAAGGAAATTTGCTGAACGACAGCGAGAAATCATAGCAGAACGGCAAAAACGTTTAGCTTTAATGGATGAGCAATTGCAAAAGAAATTAGCGCGCTACCAAGAGATAGAAGTGGCACTAAGCGTGCGGGAGCAGTGA
PROTEIN sequence
Length: 150
MTEERLLHIGEIATECGTTTRTLRYYEDLGLIGPAMRERGNGSFRLYRVETVERVRQIQELKDLLGWSLDDIRLHFQVEDEVKRMREAFHRTTSTIEKQQILIEARKFAERQREIIAERQKRLALMDEQLQKKLARYQEIEVALSVREQ*