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SCNpilot_expt_500_bf_scaffold_397_12

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(12133..12669)

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-3 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWV3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 356
  • Evalue 2.10e-95
  • rbh
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 356
  • Evalue 3.00e-95
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3 similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 173.0
  • Bit_score: 337
  • Evalue 2.50e-90
  • rbh

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGACCCGCCGCCCGCTGGCGCCAATGCCGCCGAAGAACGGCCCGCGATACAATGAATTCATCGCCTCGCCCAAGGTCCGTGTGATCGACGAGGAAGGCGAAAATCTGGGCGTAATGCTGACTGCTGAAGCGATCGAACAGGCGGCCGAAGTCGGCCTCGATCTGGTCGAAGTATCCCCCAACGCCGATCCGCCGGTGTGCAAGTTTCTGGATGTGGGCAAGTATAAATACGAAGCCCAGAAAAAGGCCAATGCGGCCCGCAAGACGCAGAAGACCCAGGAAATCAAAGAGATCAAGATGCGTCCGAACATCGACGATCATGATTTCGAAGTGAAGATGAAGAAGGTCTTCGACTTCCTCGAGGAAGGTGACAAGGTCAAGATGACCATGCGCTTCCGCGGCCGCGAAATGAGCCATACGCAGCTCGGCCTCAACGTGCTGCAGCGCGTGGCGGAGATGACGGCAGAGATCGCCAAGGTCGAGGCGCATCCGCGCACCGAAGGGCGTCAGATGCTGATGGTGCTCGCACCCAAATAG
PROTEIN sequence
Length: 179
MTRRPLAPMPPKNGPRYNEFIASPKVRVIDEEGENLGVMLTAEAIEQAAEVGLDLVEVSPNADPPVCKFLDVGKYKYEAQKKANAARKTQKTQEIKEIKMRPNIDDHDFEVKMKKVFDFLEEGDKVKMTMRFRGREMSHTQLGLNVLQRVAEMTAEIAKVEAHPRTEGRQMLMVLAPK*