ggKbase home page

SCNpilot_expt_500_bf_scaffold_397_13

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(12855..14069)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWC7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 404.0
  • Bit_score: 784
  • Evalue 5.50e-224
  • rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ENY82710.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 404.0
  • Bit_score: 784
  • Evalue 7.70e-224
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 378.0
  • Bit_score: 638
  • Evalue 1.50e-180
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGGTCGAATCCGGCATGGCGGCAGAGATGGCAGAAACGACGCGCGAGCGCCAAGGGAATGCGTCGCCGCGGCGGCAATTGCTGCGCGGTATCGCGACGCTGGCGCTTGGCGGGCTGCTCGCCGCATGCCAAGTGGTGCCGAAGACCAATGGCCCGGTAACCCCGCCGCCGCCCGACAAGCCCACCGACAATGTCGGCCCCGGTCTGCCGACCGATACCGACCGCCACCGCGTCGCGCTGCTCGTTCCGCAGACGGGAACCAACGCCGATGTCGGCATGGCGATCGCCAATGCGACGACGATGGCGCTGCTCGATACCAAGGCCGACAAGGTCCGCATCACGACGTATGACACCGCGCTGGGCGCCGCCGCTGCCGCGAAACAGGCGGTGGCCGACGGCAACAAGCTGATCCTCGGCCCGCTGCTCAGCGAGGATGTCACCGCGGTGGCGCCGATCGCGCGGGCGGCGAAGGTGCCCGTCATCAGCTTTTCGAACGACAGCAGCGTCGCGGGCAACGGCGTCTTCATCATGGGCTTCGTCCCCGGCCAGTCGGTCGAACGGGTCGTGAGCTTTGCCCGCGCCAAGGGGCAGCAGCGCTTCGGCGCGCTGATCCCCAAGAATCTTTATGGCGAGCGTTCGATGGCGGCGTTCAAGGCGGCGGTCGCCAATGCGGGCGGAACGCTCGTCGCGACCGAAACCTATGACCGCAGCGCCGCGGCGCTGACCGGCGCGGCGCGCCGTCTGGCGAGCGCGGGTGCGATGGACGCGGTGCTGATCGCCGACGTCGGCGGCAATGCGGTGCGCGCGGTTCCGATCATCAAGGGCGCGGGACAGCGCCAGATCCTCGGCACCGAATTGTGGAACACCGATGCGACACTGGGCGGCAACCCGGCGATGCGCGGTGCATGGTTCGCCAGTGTTTCGGACGGCCTCTACGGCCAGCTCGCCACCAAATATCGCACCCGGTTCGGCAAGGCGCCCTATCGCCTGGCCAGCCTCGGCTATGATTCGGTGCTGCTGACGGTGCGCATTGCGCGTGACTGGAAGCCGGGGACCAACTTTCCTGCCGGGCGCCTGATGGCGGCGGACGGGTTCGGCGGCATCGACGGCATCTTCCGCTTCAACGACCGCGGCATCGCGATCCGCGCGCTGGAGGTCAGCGAGGTGGGGGCGGGCGGCTTCCGCGTAATCGACCCCGCGCCCGCCAAATGGTAG
PROTEIN sequence
Length: 405
MVESGMAAEMAETTRERQGNASPRRQLLRGIATLALGGLLAACQVVPKTNGPVTPPPPDKPTDNVGPGLPTDTDRHRVALLVPQTGTNADVGMAIANATTMALLDTKADKVRITTYDTALGAAAAAKQAVADGNKLILGPLLSEDVTAVAPIARAAKVPVISFSNDSSVAGNGVFIMGFVPGQSVERVVSFARAKGQQRFGALIPKNLYGERSMAAFKAAVANAGGTLVATETYDRSAAALTGAARRLASAGAMDAVLIADVGGNAVRAVPIIKGAGQRQILGTELWNTDATLGGNPAMRGAWFASVSDGLYGQLATKYRTRFGKAPYRLASLGYDSVLLTVRIARDWKPGTNFPAGRLMAADGFGGIDGIFRFNDRGIAIRALEVSEVGAGGFRVIDPAPAKW*