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SCNpilot_expt_500_bf_scaffold_397_29

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(26244..26873)

Top 3 Functional Annotations

Value Algorithm Source
Recombination protein RecR n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH16_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 198.0
  • Bit_score: 389
  • Evalue 2.70e-105
  • rbh
recR; recombination protein RecR; K06187 recombination protein RecR similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 198.0
  • Bit_score: 374
  • Evalue 2.10e-101
  • rbh
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 210.0
  • Bit_score: 392
  • Evalue 4.40e-106

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Taxonomy

RHI_Sphingopyxis_65_19 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
GTGCATATCTTGCACACCCATTACCACCGCCGCATGGCGTCTACCGAAATCGAAGCCCTCGTTCAGCAACTCGCCCGGCTCCCCGGCCTTGGCCCGCGGTCGGCGCGGCGCGCGGTGCTGCATCTGATGAAAAAGCGCGAGAGCAGTTTTGCGCCCTTGCTCGCGGCACTCCAGACGGTGTCCGAACGGCTGGTGACGTGCGGCATCTGCGGCAATGTCGATACCAGCGACCCCTGCGCGATCTGCGCCGATCCGCGCCGCGACCCGCGCAGCCTGTGCGTCGTCGAGGAAGTGTCGGACCTGTGGGCGCTCGACAAGTCGCGGCTGTTTCCCGGCAAATATCATGTGCTGGGCGGCCGCCTGTCGGCGCTGGAAGGCGTGCGGCCGCAGGATTTGAGCATCGACGCGCTCGTGGCGCGCGTCGCGGCGGGCGGCATCGACGAGGTGGTGCTGGCGATGAACGCGACGCTGGAGGGGCAGACGACGGCGCATTATCTCGCCGAGCGGCTGGAGGGCTATCCGGTGCGGCTGACGCAGCTGGCGCATGGCCTGCCGGTCGGCGGCGAGCTCGACTATCTCGACGAGGGAACGCTGGCGCAGGCGCTGCGGGCGCGGCGTCCGGTCTCTTGA
PROTEIN sequence
Length: 210
VHILHTHYHRRMASTEIEALVQQLARLPGLGPRSARRAVLHLMKKRESSFAPLLAALQTVSERLVTCGICGNVDTSDPCAICADPRRDPRSLCVVEEVSDLWALDKSRLFPGKYHVLGGRLSALEGVRPQDLSIDALVARVAAGGIDEVVLAMNATLEGQTTAHYLAERLEGYPVRLTQLAHGLPVGGELDYLDEGTLAQALRARRPVS*