ggKbase home page

SCNpilot_expt_500_bf_scaffold_629_8

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 4616..5080

Top 3 Functional Annotations

Value Algorithm Source
Endoribonuclease L-PSP n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W0G1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 154.0
  • Bit_score: 300
  • Evalue 1.20e-78
Endoribonuclease L-PSP {ECO:0000313|EMBL:ENY80987.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 154.0
  • Bit_score: 300
  • Evalue 1.70e-78
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 154.0
  • Bit_score: 243
  • Evalue 3.20e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGGATATTGCCGCCAAGCTCGCCGACCTCGGCCTCGAGCTTCCCAAACCCGCCGCGCCGGTTGCCGCCTATGTCCCCGTCGTCGAGGCCGGCGGGCTGCTGCATATCAGCGGCCAGCTTCCTTTCCGCGACGGGCAGGTCGTGACCGGACGGCTGGGCGCCGACACCGACGAGGCAAGCGGCTATGACGCCGCGCGGCGCTGTGCGCTGATGCTCGTCGCCCAGATCGGCAAGGCGCTGGACGGCGATTGGTCGCGGGTCGAAAAGATCGTCAAGCTCGGCGTGTTCGTGAACAGCGATCCCGCCTTCACGCAGCAGCCCAAGGTCGCGAACGGCGCTTCCGAGCTGATGGAATCGCTGTTCGGCGAAGCGGGTCGCCACGCGCGCAGCGCCGTCGGCGTGTCGGTGCTGCCGCTCGGCGCGGCGGTCGAAGTCGACGCGATCGTCGCGGTGAAGCCCGCGTAA
PROTEIN sequence
Length: 155
MDIAAKLADLGLELPKPAAPVAAYVPVVEAGGLLHISGQLPFRDGQVVTGRLGADTDEASGYDAARRCALMLVAQIGKALDGDWSRVEKIVKLGVFVNSDPAFTQQPKVANGASELMESLFGEAGRHARSAVGVSVLPLGAAVEVDAIVAVKPA*