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SCNpilot_expt_500_bf_scaffold_547_22

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 10848..11336

Top 3 Functional Annotations

Value Algorithm Source
TmRNA-binding small protein A n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFH6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 325
  • Evalue 2.80e-86
  • rbh
TmRNA-binding small protein A {ECO:0000313|EMBL:ENY82488.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 325
  • Evalue 3.90e-86
tmRNA-binding small protein A similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 157.0
  • Bit_score: 248
  • Evalue 1.40e-63

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGCCGAAAACCATTGCCTCGCTTACCGGCCGCCGCGCGGGCCTCATCCTTGCCGGGGTCGCGCTTGCGCTGTCGGCGGGGGGATGCGCCCAGCTCAAGGGGCGTCAGGGTTATATCGTCGATCCGGTGCTCACCCAGGCGATCACCCCCGGCGTCGACAATCGCGAGTCGGTGGAAAAGACGCTTGGGCGTCCGACCTTCGTCGGCCAGTTCGGCAACAATGAATATTATTATCTGTCGCGCGAAACGCGCCAGCTCGCCTTCGCCCACCCGCGGCCCGTGGCACAGCAGGTGCTGCGCGTCAGCTTCGATCCCGCAGGCAATGTCGTCGGCGTCGATCGCACCGGGCTCGAACAGGTGAGCAAGATCAGCCCGAACGGCGACAGCACGCCGACGCTGGGCCGTCATCGCAGTTTCTTCGAGGATATCTTCGGCAATATTGGCGCGGTTGGTGCGCCGGGTGTCGGCGGCGGCGCGCAGGGGCAATAA
PROTEIN sequence
Length: 163
MPKTIASLTGRRAGLILAGVALALSAGGCAQLKGRQGYIVDPVLTQAITPGVDNRESVEKTLGRPTFVGQFGNNEYYYLSRETRQLAFAHPRPVAQQVLRVSFDPAGNVVGVDRTGLEQVSKISPNGDSTPTLGRHRSFFEDIFGNIGAVGAPGVGGGAQGQ*