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SCNpilot_expt_500_bf_scaffold_917_5

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(2660..3436)

Top 3 Functional Annotations

Value Algorithm Source
Integrase, catalytic region n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GS92_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 229.0
  • Bit_score: 399
  • Evalue 2.40e-108
  • rbh
Integrase catalytic subunit {ECO:0000313|EMBL:AJA09577.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 258.0
  • Bit_score: 517
  • Evalue 8.60e-144
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 229.0
  • Bit_score: 399
  • Evalue 7.60e-109
  • rbh

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Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGGGCCAGCTTCTACACGGCAGCGCCAAGACCACGCACGCCGTTCGAGCGGAGCTACAGCGATCGCAAGCTCCGGTCGCGCAGCTCGCGAAGCGGTACGGGATCAACGAGAAGACGGTGATCAAGTGGCGCAGCCGGCCGTCGGTCGAGGACATGCCGGTGGGGCCGAAGGAACGGCGCAGCACCGTGCTGTCGCCGATGGAAGAAGCCGCGATCGTGGCGCTCAGGGTGCAGGCCCGGCTGCCGCTCGATGACGTCTTCATCGCGTTGAAGGACGTGATCCCGAACCTGACGCGCTCGTCGCTTCACCGCTGCCTGCAGCGGCACGGGATCAGCCGATTGCCGAAGGCGGATCGCGAGAAGCCGAAGAAGTTCAAGAAGTACGAGATCGGCTATTTCCACATCGATATCGCCGAACTGCGCTACGAAGGCGGCAAAGGATTCCTCTATGTCGCGGTGGACCGCACCTCGAAGCTGGTGTTCGCCCGCATCTATCGACGGGCGACCAAGCTCGCCGCGGCAGCCTTCCTGCGCGTGCTGATCAAGACGGTTCCCTACAGGATCCACACCATCCTGACCGACAACGGCGTGCAGTTCGTGCAGCGTGACCAGGGCGGCACACTGGGATGGATCGGCCATATCTTCGGCCGTGTCTGCGAGCAGAACGGCATCGAGCATCGCCTCACCGTAACCGGTGTTTCCCTGCCACCTTGCGGGAGTGAAGCGTGGCGTCGATTTTCGCTAGCCCGATCAGGCTGGAGGATGCTGATGCTATGA
PROTEIN sequence
Length: 259
MGQLLHGSAKTTHAVRAELQRSQAPVAQLAKRYGINEKTVIKWRSRPSVEDMPVGPKERRSTVLSPMEEAAIVALRVQARLPLDDVFIALKDVIPNLTRSSLHRCLQRHGISRLPKADREKPKKFKKYEIGYFHIDIAELRYEGGKGFLYVAVDRTSKLVFARIYRRATKLAAAAFLRVLIKTVPYRIHTILTDNGVQFVQRDQGGTLGWIGHIFGRVCEQNGIEHRLTVTGVSLPPCGSEAWRRFSLARSGWRMLML*